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comments
0
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replies
1.7k
views
Comment:
C: Error IsoformSwitchAnalyzeR with kallisto data and ensembl annotation gtf
4.7 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
2
votes
1
reply
3.2k
views
Comment:
C: Can you detect novel (non-coding) transcripts using Salmon and the hg38 transcri
4.7 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
1
vote
1
reply
3.2k
views
Comment:
C: Can you detect novel (non-coding) transcripts using Salmon and the hg38 transcri
4.7 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
2
votes
1
reply
3.2k
views
Comment:
C: Can you detect novel (non-coding) transcripts using Salmon and the hg38 transcri
4.7 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
1
reply
918
views
Comment:
A: IsoformSwitchAnalyzeR and cuffdiff data error
4.7 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
3
votes
0
replies
3.7k
views
Comment:
C: Which bias flags to run with Salmon before DESeq2 analysis?
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
0
replies
1.1k
views
Comment:
C: inconsistent results of rsem quantification
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
1
reply
21k
views
Comment:
C: Using Seurat 3 Data for Pseudotime Analysis in Monocle 3
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
0
replies
4.1k
views
Comment:
C: limma voom - mean variance trend
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
0
replies
1.1k
views
Comment:
C: Intron finder for 3' UTR sequences (non-model organism)?
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
1
reply
4.1k
views
Comment:
C: limma voom - mean variance trend
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
0
replies
1.7k
views
Comment:
C: Error IsoformSwitchAnalyzeR with kallisto data and ensembl annotation gtf
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
1
reply
1.5k
views
Comment:
C: Can I convert from PSI to RPKM?
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
3
votes
1
reply
2.5k
views
Comment:
C: see reads in .bam file, no counts after HTseq
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
1
vote
0
replies
2.5k
views
Comment:
C: see reads in .bam file, no counts after HTseq
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
1
reply
3.4k
views
Comment:
C: Analysis rMATS of RNA Seq data
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
0
replies
5.1k
views
Comment:
C: Alternative splicing analysis following kallisto?
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
1
vote
1
reply
2.4k
views
Comment:
C: What is the most suitable normalisation technique for RNASeq data?
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
1
reply
3.4k
views
Comment:
C: Analysis rMATS of RNA Seq data
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
0
replies
1.5k
views
Comment:
C: Salmon quasi Index upgrade
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
0
replies
1.2k
views
Comment:
A: de novo assembly of raw illumina reads of RNA seq experiment (24gb data)
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
1
reply
1.5k
views
Comment:
C: Can I convert from PSI to RPKM?
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
0
replies
1.5k
views
Comment:
C: Can I convert from PSI to RPKM?
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
0
replies
7.1k
views
Comment:
C: How to group gene dataset and run t.test for each row for every gene in R?
4.8 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
0
replies
1.7k
views
Comment:
C: Error IsoformSwitchAnalyzeR with kallisto data and ensembl annotation gtf
4.9 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
0
replies
2.1k
views
Comment:
C: SpliceJumper installation issues. Particularly with make
4.9 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
1
reply
2.1k
views
Comment:
C: SpliceJumper installation issues. Particularly with make
4.9 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
1
reply
1.7k
views
Comment:
C: Error IsoformSwitchAnalyzeR with kallisto data and ensembl annotation gtf
4.9 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
0
replies
2.3k
views
Comment:
C: How to find SSR location i.e whether it is in CDS, or UTR
4.9 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
1
reply
962
views
Comment:
C: Transcriptome analysis between two sample.
4.9 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
0
replies
1.7k
views
Comment:
C: Mean-variance trend in voom
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
1
reply
2.0k
views
Comment:
C: General question about batch effect, read trimming and what to do when the adapt
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
2
replies
6.7k
views
Comment:
C: How to make a plot with gProfileR results?
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
0
replies
4.0k
views
Comment:
C: [rMATS] Number of AS Events from one sample
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
1
vote
0
replies
4.0k
views
Comment:
C: [rMATS] Number of AS Events from one sample
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
1
vote
1
reply
4.0k
views
Comment:
C: [rMATS] Number of AS Events from one sample
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
2
votes
0
replies
2.8k
views
Comment:
Comment: TopHat error: IOError [errno 2] No such file or directory: '-o'
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
1
vote
0
replies
4.0k
views
Comment:
C: [rMATS] Number of AS Events from one sample
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
1
reply
1.2k
views
Comment:
C: ADVOCATE R package
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
4
votes
1
reply
15k
views
Comment:
C: Tools To Do the Alternative Splicing Analysis
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
0
replies
1.2k
views
Comment:
C: Cufflinks transcriptome (To build or not to build?)
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
1
vote
1
reply
1.2k
views
Comment:
C: Cufflinks transcriptome (To build or not to build?)
5.0 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
1
reply
3.7k
views
Comment:
C: transcripts assemble by StringTie
5.1 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
0
replies
2.6k
views
Comment:
C: Fastest (non-pseudo) aligner for RNA-seq illumina seq data (year 2019)
5.1 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
1
vote
0
replies
1.5k
views
Comment:
C: Understanding FANTOM5 CAGE fields
5.1 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
1
vote
1
reply
1.7k
views
Comment:
C: How to create a summary statistics data table for omics data?
5.1 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
0
replies
1.5k
views
Comment:
C: Is there a good way to get the proportions of isoforms *within* a condition usin
5.1 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
0
replies
4.0k
views
Comment:
C: ANOVA or Linear regression for RNAseq data analysis with 3 factors
5.2 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
1
reply
1.5k
views
Comment:
C: Is there a good way to get the proportions of isoforms *within* a condition usin
5.2 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
0
votes
1
reply
15k
views
Comment:
C: Tools To Do the Alternative Splicing Analysis
5.2 years ago by
Kristoffer Vitting-Seerup
★ 4.0k
258 results • Page
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