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1
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2
replies
759
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How to use conumee segment mean for gistic input
genomics gistic NGS methylation conumee
9 months ago by Thind amarinder ▴ 340
0
votes
2
replies
809
views
solution for lncRNA naming issues for annotation and Functional analysis
annotations lncRNA functional
2.7 years ago by Thind amarinder ▴ 340
4
votes
3
replies
2.1k
views
Liftover vs Ensembl Crossmap
crossmap liftover converter assembly ensembl
3.4 years ago by Thind amarinder ▴ 340
0
votes
0
replies
698
views
Adjustment of number of mutations of 3'UTR region for UTR length
UTR SNV RNA-Seq genome sequence
3.6 years ago by Thind amarinder ▴ 340
0
votes
0
replies
852
views
interaction prediction of circRNA and miRNA and co -expression network
miRNA circRNA coexpression RNA-Seq NGS
3.8 years ago by Thind amarinder ▴ 340
0
votes
0
replies
969
views
Pipeline which take care of tumor-normal contamination to correlate VAF, CNA and mRNA expression (WGS, RNASeq)
RNA-Seq whole genome sequencing SNV next-gen CNA
4.0 years ago by Thind amarinder ▴ 340
2
votes
2
replies
2.3k
views
How to compare gene TPM values of two different conditions obtained from different experiments (for overview)
RNA-Seq TPM normalization
2.7 years ago by Thind amarinder ▴ 340
0
votes
0
replies
763
views
query regarding miRNA-mRNA co-expression analysis
co-expression RNA-Seq transcriptomics R next-gen
4.2 years ago by Thind amarinder ▴ 340
0
votes
0
replies
1.0k
views
Gene copy number Alteration Interpretation
purple CNA WGS Cancer
updated 4.2 years ago by 20 • written 4.3 years ago by ▴ 340
5
votes
5
replies
3.6k
views
Role of large/small sample size in adjusting p-value
statistics genomics next-gen SNP software error
2.8 years ago by Thind amarinder ▴ 340
1
vote
6
replies
4.0k
views
Conversion of Vep.vcf to MAF format?
cancer vep maf snp genome
4.3 years ago by Thind amarinder ▴ 340
2
votes
6
replies
1.2k
views
How to compare and visualize own data with other cBioportal based studies?
cbioportal tcga
updated 4.3 years ago by 145k • written 4.3 years ago by ▴ 340
2
votes
5
replies
1.2k
views
Which DE method perform better for small number of genes
RNA-Seq deseq2 edgeR noiseq ttest
updated 4.4 years ago by 104k • written 4.4 years ago by ▴ 340
3
votes
10
replies
1.8k
views
How to compare coexpression networks from two conditions with different sample sizes
correlation coexpression rna-seq gene networks
5.4 years ago by Thind amarinder ▴ 340
0
votes
1
reply
2.3k
views
Not able to retrieve PDB id from standalone blast against PDB
blast
updated 2.2 years ago by 44k • written 9.5 years ago by ▴ 340
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