User: bkafsack

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bkafsack0
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CUFFMERGE from many assemblies to define transcripts but only compare a subset?
... I have RNAseq assemblies for the same organism from multiple different experiments. Let's say I have experiments A, B, and C each with conditions 1 and 2. Under the assumption that exon usage doesn't vary between experiments, can I use cuffmerge on all the assemblies to get a better overall model o ...
cuffmerge rna-seq cuffdiff cufflinks tuxedo written 2.7 years ago by bkafsack0 • updated 2.7 years ago by Satyajeet Khare1.4k

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