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Comment: Comment: DESeq2 error while using apeglm - optimHess
12 months ago by Kumar ▴ 170
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0
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366
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How do we know that the AMR genes/ MGEs in the contig sequence is on plasmid or Chromosome?
bacteria plasmid
updated 14 months ago by 43k • written 14 months ago by ▴ 170
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0
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861
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Comment: Comment: How to download coronavirus genomes and its metadata file in only animals
17 months ago by Kumar ▴ 170
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0
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861
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Comment: Comment: How to download coronavirus genomes and its metadata file in only animals
17 months ago by Kumar ▴ 170
1
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6
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861
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How to download coronavirus genomes and its metadata file in only animals
coronavirus NCBI metadata Genome
updated 17 months ago by ▴ 720 • written 17 months ago by ▴ 170
11
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9
replies
4.4k
views
6 follow
How to run STAR with multiple files
alignment rna-seq SRAT-aligner
updated 18 months ago by ★ 4.3k • written 3.6 years ago by ▴ 170
2
votes
1
reply
598
views
How to make a phylogenetic tree using numerical values
phylogenetic phylip tree mlst genome
updated 19 months ago by ▴ 880 • written 19 months ago by ▴ 170
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0
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357
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How to make phylogenetic using binary data
binary sequence phylogenetic tree
20 months ago by Kumar ▴ 170
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0
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367
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How to run logisticPCA on binary data
Binary genome PCA logisticPCA
20 months ago by Kumar ▴ 170
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0
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483
views
hierBAPS for hierarchical clusters?
R SNP rhierbaps
21 months ago by Kumar ▴ 170
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1
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908
views
Comment: Comment: Combine metadata
21 months ago by Kumar ▴ 170
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1
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908
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Comment: Comment: Combine metadata
21 months ago by Kumar ▴ 170
0
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1
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908
views
Comment: Comment: Combine metadata
21 months ago by Kumar ▴ 170
0
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8
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908
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Combine metadata
python metadata genome
updated 21 months ago by 43k • written 21 months ago by ▴ 170
0
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1
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798
views
Comment: Comment: How to make a dataset of machine learning model for predicting antibiotic resist
23 months ago by Kumar ▴ 170
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3
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798
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How to make a dataset of machine learning model for predicting antibiotic resistant?
learning bacteria antibiotic machine resistant
updated 23 months ago by ★ 27k • written 23 months ago by ▴ 170
1
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3
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808
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How to run Trimmomatic with multiple files in a loop
Trimmomatic fastq trimming
updated 2.0 years ago by ★ 27k • written 2.0 years ago by ▴ 170
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0
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1.2k
views
Comment: Comment: How to run Unicycler for hybrid assembly with multiple samples
2.0 years ago by Kumar ▴ 170
1
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2
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1.2k
views
How to run Unicycler for hybrid assembly with multiple samples
assembly fastq Unicycler bacteria
2.0 years ago by Kumar ▴ 170
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0
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744
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Comment: Comment: How to illustrate positions (start and stop) of the genes in graphical view
2.1 years ago by Kumar ▴ 170
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1
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1.0k
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Comment: Comment: Microbial community analysis pipelines in metagenomics
2.1 years ago by Kumar ▴ 170
0
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2
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744
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How to illustrate positions (start and stop) of the genes in graphical view
Genes-regions genome positions
2.1 years ago by Kumar ▴ 170
0
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0
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5.0k
views
Answer: Answer: problem in launching prokka
2.2 years ago by Kumar ▴ 170
2
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11
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2.3k
views
how to run seqkit in a loop with multiple files
seqkit scaffolds python
2.2 years ago by Kumar ▴ 170
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0
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2.3k
views
Comment: Comment: how to run seqkit in a loop with multiple files
2.2 years ago by Kumar ▴ 170
0
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2
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2.3k
views
Comment: Comment: how to run seqkit in a loop with multiple files
2.2 years ago by Kumar ▴ 170
0
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1
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2.3k
views
Comment: Comment: how to run seqkit in a loop with multiple files
2.2 years ago by Kumar ▴ 170
1
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1
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1.6k
views
Comment: Comment: Bacterial genome hybrid assembly
2.2 years ago by Kumar ▴ 170
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1
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2.0k
views
Comment: Comment: How to make circularize genome assembly after polishing
2.2 years ago by Kumar ▴ 170
0
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0
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1.6k
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Comment: Comment: Bacterial genome hybrid assembly
2.2 years ago by Kumar ▴ 170
0
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3
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2.0k
views
How to make circularize genome assembly after polishing
Assembly Genome Flye assember Pilon
updated 2.2 years ago by 3.6k • written 2.2 years ago by ▴ 170
1
vote
1
reply
602
views
How to perform multiple sequence alignment with large nucleotide sequence
genome multiple sequence alignment nucleotide
updated 2.3 years ago by 141k • written 2.3 years ago by ▴ 170
0
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0
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3.2k
views
Comment: Comment: Hybrid assembly SPAdes (Ox. Nanopore + Illumina)
2.3 years ago by Kumar ▴ 170
0
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1
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1.0k
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Comment: Comment: How to assemble viral genome using MIRA assembler
2.3 years ago by Kumar ▴ 170
0
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3
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1.0k
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How to assemble viral genome using MIRA assembler
assembly MIRA virus Genome
updated 2.3 years ago by 100k • written 2.3 years ago by ▴ 170
0
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1
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1.9k
views
Comment: Comment: How to make hybrid assembly of a viral genome
2.4 years ago by Kumar ▴ 170
0
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1
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1.9k
views
Comment: Comment: How to make hybrid assembly of a viral genome
2.4 years ago by Kumar ▴ 170
0
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1
reply
1.9k
views
Comment: Comment: How to make hybrid assembly of a viral genome
2.4 years ago by Kumar ▴ 170
0
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1
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1.9k
views
Comment: Comment: How to make hybrid assembly of a viral genome
2.4 years ago by Kumar ▴ 170
0
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9
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1.9k
views
How to make hybrid assembly of a viral genome
Virus Illumina Hybrid Genome assembly MinION
updated 2.4 years ago by ★ 2.4k • written 2.4 years ago by ▴ 170
0
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0
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1.1k
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Comment: Comment: How to assemble a genome from scaffolds to Chromosome level
2.4 years ago by Kumar ▴ 170
0
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1
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1.1k
views
Comment: Comment: How to assemble a genome from scaffolds to Chromosome level
2.4 years ago by Kumar ▴ 170
0
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0
replies
956
views
Comment: Comment: How to calculate distance matrix and phylogenetic tree for genome alignment
2.4 years ago by Kumar ▴ 170
0
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2
replies
956
views
How to calculate distance matrix and phylogenetic tree for genome alignment
distance phylogenetic Genome tree matrix
2.4 years ago by Kumar ▴ 170
0
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1
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2.4k
views
Comment: Comment: How to download all accession ID of CDS from all viral genome
2.5 years ago by Kumar ▴ 170
0
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1
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2.4k
views
Comment: Comment: How to download all accession ID of CDS from all viral genome
2.5 years ago by Kumar ▴ 170
0
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1
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2.4k
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Comment: Comment: How to download all accession ID of CDS from all viral genome
2.5 years ago by Kumar ▴ 170
0
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1
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2.4k
views
Comment: Comment: How to download all accession ID of CDS from all viral genome
2.5 years ago by Kumar ▴ 170
0
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14
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2.4k
views
How to download all accession ID of CDS from all viral genome
genome accession viral NCBI nucleotide
updated 2.5 years ago by 141k • written 2.5 years ago by ▴ 170
0
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0
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2.4k
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Comment: Comment: How to download all accession ID of CDS from all viral genome
2.5 years ago by Kumar ▴ 170
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