User: Ardmore

gravatar for Ardmore
Ardmore140
Reputation:
140
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New User
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Last seen:
9 years, 2 months ago
Joined:
9 years, 7 months ago
Email:
z*******@yahoo.com

Posts by Ardmore

<prev • 11 results • page 1 of 2 • next >
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About P/Or Value
... In GWAS Analysis using PLINK. In assoc file result there is a column P and OR. I am not sure what is "OR". What does it mean "OR"? And what are expected values? I mean higher value or lower value? Thanks, ...
gwas plink written 9.2 years ago by Ardmore140 • updated 9.2 years ago by David Quigley11k
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Does Hapmap2 Have Overlap With 1Kg?
... Does HAPMAP2 have overlap with 1KG? Or can we merge them together? I mean genotype. ...
hapmap genome written 9.3 years ago by Ardmore140 • updated 2.7 years ago by Biostar ♦♦ 20
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Comment: C: T Becomes T T In Plink
... Can you give me some link about anti-parallel and complementary? I am really confused about it. And even I don't know the concept of copy 1 nad 2. Let me give you an example, individul say "ardmore" has two chromosomes. In "ardmore"'s chromosome 6 bp position from 32,000,000 to 32,000,004 the genoty ...
written 9.3 years ago by Ardmore140
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Comment: C: T Becomes T T In Plink
... I have difficult to understand the concepts. Each chromosome(DNA) has two chains.So genotypes AT comes from each chain? ...
written 9.3 years ago by Ardmore140
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T Becomes T T In Plink
... A basic concept question: In Plink analysis, the genotype "T" will be replaced with "T T" My question is not why computer need such an input format, my question is a pure biology question. Why there is only one genotype here? Thanks. ...
snp genomics plink written 9.3 years ago by Ardmore140 • updated 9.3 years ago by David Quigley11k
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Comment: C: Genomics Population Codes
... Yes. You may be right. Thanks for sharing. ...
written 9.6 years ago by Ardmore140
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Multi Sequences Alignment
... Hi, I have 100 sequences. Each of them has 6000 chars. I want to find a way to align them. Any tools or algorithms? Thanks. ...
sequence alignment written 9.6 years ago by Ardmore140 • updated 9.6 years ago by Kartik Sunagar290
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Genomics Population Codes
... Hi, I want to get the description of the population code such as "CGEMS" etc. Now I only got one at ftp://ftp-trace.ncbi.nih.gov/1000genomes/ftp/README.populations. But it is not enough. Thanks. ...
gwas dbsnp genomics written 9.6 years ago by Ardmore140 • updated 9.6 years ago by Jorge Amigo12k
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Comment: C: Download Hg18 Snp Database
... Okay. Thanks, I will read the guidance. It is my first visit. I don't know the conversion tools you mentioned. Could you please advise me a little bit? ...
written 9.6 years ago by Ardmore140
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Comment: C: Download Hg18 Snp Database
... I want to generate the map file that contains all snps in hg18/build36. ...
written 9.6 years ago by Ardmore140

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