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Answer: A: Any Local Gui-Guided Blast Tools?
updated 4.0 years ago by 40k • written 12.4 years ago by ★ 1.5k
3
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0
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2.4k
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Answer: A: Searching 200-400Bp Matches Against Mammalian Genome (~Human-Mouse Distance)
updated 4.0 years ago by 40k • written 12.4 years ago by ★ 1.5k
0
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0
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1.0k
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Comment: C: Mapping exonic sequences across species
4.3 years ago by Geparada ★ 1.5k
0
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1
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1.0k
views
Comment: C: Mapping exonic sequences across species
4.3 years ago by Geparada ★ 1.5k
0
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0
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1.0k
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Comment: C: Mapping exonic sequences across species
4.3 years ago by Geparada ★ 1.5k
1
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6
replies
1.0k
views
Mapping exonic sequences across species
alignment genome
4.3 years ago by Geparada ★ 1.5k
0
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0
replies
953
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Comment: C: How do I find the same gene in two different assemblies?
4.3 years ago by Geparada ★ 1.5k
0
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0
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16k
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Comment: C: Long read alignment
4.3 years ago by Geparada ★ 1.5k
0
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0
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2.4k
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Comment: C: Seeking Freelance bioinformatician
4.3 years ago by Geparada ★ 1.5k
0
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0
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751
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Answer: A: Converting to homologs
4.3 years ago by Geparada ★ 1.5k
0
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0
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16k
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Comment: C: How to determine if SRA file is single or paired end?
4.7 years ago by Geparada ★ 1.5k
1
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1
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4.0k
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Answer: A: Filtering sam/bam by using CIGAR deletion sites
4.7 years ago by Geparada ★ 1.5k
2
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0
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1.5k
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Answer: A: RNA Splicing databases
4.7 years ago by Geparada ★ 1.5k
0
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0
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5.2k
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Comment: C: How The Non-Canonical Intron Splice Sites Came Out?
4.7 years ago by Geparada ★ 1.5k
0
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0
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1.2k
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Comment: C: Question on UCSC genome browser display
5.6 years ago by Geparada ★ 1.5k
0
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1
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2.5k
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Comment: C: rsem-prepare-reference and mouse mm9 genome reference files
5.6 years ago by Geparada ★ 1.5k
0
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0
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1.1k
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What is the proportion of transcripts that are targeted by NMD on vertebrates genomes?
gene expresion bionumber RNA-Seq
6.7 years ago by Geparada ★ 1.5k
3
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0
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14k
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Answer: A: HISAT2 or Tophat2
6.7 years ago by Geparada ★ 1.5k
2
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0
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6.5k
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Comment: C: Analysis of single-cell RNA-seq data
7.2 years ago by Geparada ★ 1.5k
20
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5
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6.5k
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Tutorial: Analysis of single-cell RNA-seq data
single-cell RNA-Seq
updated 5 months ago by 40k • written 7.3 years ago by ★ 1.5k
17
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15
replies
15k
views
9 follow
Gencode Gtf To Bed12 Or Psl
ucsc annotation gtf bed
updated 7.8 years ago by ▴ 190 • written 11.9 years ago by ★ 1.5k
9
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12
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3.5k
views
Memory leak while reading a bigwig in python
python bigwig
updated 16 months ago by 40k • written 8.5 years ago by ★ 1.5k
0
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1
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3.5k
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Comment: C: Memory leak while reading a bigwig in python
8.5 years ago by Geparada ★ 1.5k
11
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6
replies
21k
views
How To Merge Overlapping Two Or More Dna Sequence?
pairwise sanger sequencing
updated 19 months ago by 40k • written 12.1 years ago by ★ 1.5k
52
votes
21
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47k
views
11 follow
Fastq Splitter For Paired End Reads
rna
updated 3 months ago by 40k • written 11.5 years ago by ★ 1.5k
2
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1
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5.2k
views
Answer: A: How The Non-Canonical Intron Splice Sites Came Out?
9.1 years ago by Geparada ★ 1.5k
1
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0
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3.6k
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Comment: Comment: How to remove non canonical introns (junctions) in TopHat/Cufflink
updated 23 months ago by 40k • written 9.1 years ago by ★ 1.5k
1
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1
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3.6k
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Answer: Answer: How to remove non canonical introns (junctions) in TopHat/Cufflink
updated 23 months ago by 40k • written 9.3 years ago by ★ 1.5k
1
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5
replies
3.2k
views
Troubles Installing Qpalma To Run Palmapper ...
next-gen sequencing mapping installation
updated 9.4 years ago by 20 • written 11.8 years ago by ★ 1.5k
4
votes
5
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2.4k
views
Significant Differences Of Motif Enrichment Between Two Different Groups Of Sequences
sequence motif enrichment
updated 9.4 years ago by • 0 • written 10.6 years ago by ★ 1.5k
17
votes
11
replies
12k
views
What Is The Most Direct Way To Extract The Splice Junctions From A Sam File?
sam intron rna
updated 9.5 years ago by 20 • written 12.0 years ago by ★ 1.5k
5
votes
5
replies
11k
views
Emule "Samtools View" Using Pysam
sam bam python
updated 9.6 years ago by ★ 2.0k • written 11.3 years ago by ★ 1.5k
1
vote
5
replies
4.2k
views
Mapping Trimmed Paired End Reads With Mapsplice
paired-end next-gen trimming
updated 9.9 years ago by 20 • written 11.5 years ago by ★ 1.5k
13
votes
17
replies
7.0k
views
10 follow
Which Program Should I Test To Map Rnaseq Data? Did Anybody Tried Gsnap?
rna mapping intron bowtie blat
updated 10.0 years ago by 20 • written 12.4 years ago by ★ 1.5k
2
votes
6
replies
3.4k
views
How To Mount A Ftp Server In A Ec2 Amazon Instance To Host A Uscs Hub?
ucsc
updated 10.1 years ago by 98k • written 10.2 years ago by ★ 1.5k
0
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0
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3.4k
views
Comment: C: How To Mount A Ftp Server In A Ec2 Amazon Instance To Host A Uscs Hub?
10.1 years ago by Geparada ★ 1.5k
2
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1
reply
3.0k
views
Answer: A: Exons Associated With Multiple "Genes" In Ucsc Genome Data
10.2 years ago by Geparada ★ 1.5k
0
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0
replies
3.4k
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Comment: C: How To Mount A Ftp Server In A Ec2 Amazon Instance To Host A Uscs Hub?
10.2 years ago by Geparada ★ 1.5k
0
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1
reply
3.4k
views
Comment: C: How To Mount A Ftp Server In A Ec2 Amazon Instance To Host A Uscs Hub?
10.2 years ago by Geparada ★ 1.5k
0
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0
replies
6.5k
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Comment: C: Visualizing Coverage Of Ngs Reads Across Reference Genome
10.2 years ago by Geparada ★ 1.5k
0
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0
replies
7.2k
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Comment: C: Samtools Pipelines
10.2 years ago by Geparada ★ 1.5k
0
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1
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7.2k
views
Comment: C: Samtools Pipelines
10.2 years ago by Geparada ★ 1.5k
10
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6
replies
7.2k
views
Samtools Pipelines
samtools ngs pipeline
updated 10.2 years ago by 7.7k • written 10.2 years ago by ★ 1.5k
1
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0
replies
15k
views
Answer: A: Bowtie & Tophat
10.4 years ago by Geparada ★ 1.5k
0
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0
replies
2.4k
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Comment: C: Significant Differences Of Motif Enrichment Between Two Different Groups Of Sequ
10.6 years ago by Geparada ★ 1.5k
0
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0
replies
3.9k
views
Answer: A: Problems With A Python Script Used To Simulate Protein Cutting By Trypsin
10.6 years ago by Geparada ★ 1.5k
0
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1
reply
9.6k
views
Comment: C: Any Script To Parse Fasta Headers?
10.6 years ago by Geparada ★ 1.5k
2
votes
1
reply
13k
views
Answer: A: Visualize Strand-Specific Rna-Seq : How To Differentiate Strands
10.6 years ago by Geparada ★ 1.5k
1
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0
replies
8.6k
views
Answer: A: How To Map The Fastq With Paired-End Seq Combined In One File
10.7 years ago by Geparada ★ 1.5k
0
votes
0
replies
4.2k
views
Comment: C: Mapping Trimmed Paired End Reads With Mapsplice
10.7 years ago by Geparada ★ 1.5k
143 results • Page 1 of 3
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