User: ejliaw

ejliaw • 30

Reputation:: 30
Status:: New User
Location:: United States
Last seen:: 5 years, 6 months ago
Joined:: 5 years, 8 months ago
Email:: e*****@stanford.edu

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Comment: C: What is Scheffé's test, and can post-hoc tests tell me in which time points a di

... The question of which binary up-down pattern best fits my time-series data was explored with StepMiner in Sahoo et al., "Extracting binary signals from microarray time-course data", Nucleic Acid Research (2006) 35 (11):3705-3712. http://nar.oxfordjournals.org/content/35/11/3705.long That paper used ...

written 5.6 years ago by ejliaw • 30

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What is Scheffé's test, and can post-hoc tests tell me in which time points a differential peak, from time series DNAse-seq data, had higher signal?

... I have DNase-seq data from 7 time points, 2 replicates for each time point (14 samples total). For each DNase-seq peak, I want to determine in which subset of time points the signal is significantly increased compared to the complement set of other time points. A related question would be to determi ...

time series next-gen mars analysis dnase-seq written 5.7 years ago by ejliaw • 30 • updated 4.8 years ago by Biostar ♦♦ 20

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