User: Dr.Bunsen

gravatar for Dr.Bunsen
Dr.Bunsen150
Reputation:
150
Status:
New User
Location:
Website:
http://drbunsen.org
Last seen:
7 years, 6 months ago
Joined:
8 years, 5 months ago
Email:
s********@drbunsen.org

Posts by Dr.Bunsen

<prev • 23 results • page 1 of 3 • next >
0
votes
4
answers
7.2k
views
4
answers
Comment: C: Protein Alignment Tool With Vector Graphics Output?
... Thanks, this turned out to be a very good solution. ...
written 7.6 years ago by Dr.Bunsen150
0
votes
4
answers
7.2k
views
4
answers
Comment: C: Protein Alignment Tool With Vector Graphics Output?
... I'm only concerned with sequence. ...
written 7.6 years ago by Dr.Bunsen150
12
votes
4
answers
7.2k
views
8 follow
4
answers
Protein Alignment Tool With Vector Graphics Output?
... I'm making several figures that contain protein alignments. What are the best tools to use for creating protein alignments that are capable of outputting vector graphics? Ideally, I would like to use MUSCLE for the alignment. I would like to generate alignments and export them as vector graphics. Th ...
alignment sequence multiple written 7.6 years ago by Dr.Bunsen150 • updated 3.4 years ago by Suzanne60
3
votes
1
answer
2.0k
views
1
answer
Summary Table Of Histone Marks?
... I am looking for a simple table or illustration summarizing the majority of post-translational histone modifications and the general functions of each mark. Does anyone know of a good resource? Preferably, the information would be from a recent journal review. I am looking for something such this fi ...
written 7.8 years ago by Dr.Bunsen150 • updated 7.8 years ago by Casey Bergman18k
0
votes
1
answer
4.6k
views
1
answers
Comment: C: How To Download All Ncbi Gtex Eqtl Data
... Thanks David! Sorry for the confusion, I see what you mean now. ...
written 7.9 years ago by Dr.Bunsen150
0
votes
1
answer
4.6k
views
1
answers
Comment: C: How To Download All Ncbi Gtex Eqtl Data
... Thanks, yes I discovered this option too. The problem is that there are around one hundred experiments, so I was hoping to avoid doing this manually. By experiments I'm assuming you mean "phenotypic traits"? ...
written 7.9 years ago by Dr.Bunsen150
3
votes
1
answer
4.6k
views
1
answer
How To Download All Ncbi Gtex Eqtl Data
... Does anyone know how to download all the NCBI GTeX eQTLs? From the browser it is trivial to search for eQTLs from a list of SNPs or other criteria, but I can't figure out how to actually download/access ALL the data. Thanks for the help! ...
ncbi written 7.9 years ago by Dr.Bunsen150 • updated 7.9 years ago by David Quigley11k
0
votes
4
answers
4.7k
views
4
answers
Comment: C: How To Gather Sequences Of Snp Flanking Regions In A Given Range (Alternatives T
... Thanks Aaron. I did eventually get it working with Homebrew. Just so your aware, there seems to be an issue with the location of the genome directory when installed via Homebrew. This is a fantastic tool! Thanks for making me aware of it's existence. ...
written 7.9 years ago by Dr.Bunsen150
0
votes
4
answers
4.7k
views
4
answers
Comment: C: How To Gather Sequences Of Snp Flanking Regions In A Given Range (Alternatives T
... Thanks Aarron. One additional question. I installed bedtools via Homebrew and can't seem to located the hg19.genome file. In the docs it says, "BEDTools includes predefined genome files for human and mouse in the /genomes directory included in the BEDTools distribution." Do you know what directory t ...
written 8.0 years ago by Dr.Bunsen150
0
votes
4
answers
4.7k
views
4
answers
Comment: C: How To Gather Sequences Of Snp Flanking Regions In A Given Range (Alternatives T
... Thanks Aaron. I tried Pierre's answer and it seems to work, but I definitely didn't get all the DB132 SNPs. Only about 20K. I'm not familiar with bedtools, so thanks for suggesting it. Do I need to provide the snps.bed file? ...
written 8.0 years ago by Dr.Bunsen150

Latest awards to Dr.Bunsen

Student 8.1 years ago, asked a question with at least 3 up-votes. For How Are Ensembl'S Gene Start And End Coordinates Determined?
Popular Question 8.3 years ago, created a question with more than 1,000 views. For Encode Cell Line Genomes - Are The Genome Sequences Available?
Popular Question 8.3 years ago, created a question with more than 1,000 views. For Bigwig To Wig Conversion

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 2761 users visited in the last hour