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Comment: C: Map eukaryotic genomic reads to transcript reference of closely related organism
5.8 years ago by al-ash ▴ 200
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4.7k
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Comment: C: Method for generating a reference-based genome assembly in fasta with no referen
5.8 years ago by al-ash ▴ 200
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Map eukaryotic genomic reads to transcript reference of closely related organism
RNA-Seq splice-aware splice-unaware mapping reads
updated 5.8 years ago by ▴ 50 • written 5.8 years ago by ▴ 200
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3.4k
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Comment: C: Reduce saturation by deleting the 3rd position in each codon of DNA seqs. R ape
6.1 years ago by al-ash ▴ 200
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Answer: A: Deleting The 3Rd Codon Position In A Multiple Sequence Alignment And Substitutio
6.1 years ago by al-ash ▴ 200
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Answer: A: Filtering Msa For Phylogenetic Tree Construction
6.2 years ago by al-ash ▴ 200
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1
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83k
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Comment: C: How To Extract A Sequence From A Big (6Gb) Multifasta File ?
6.3 years ago by al-ash ▴ 200
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83k
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Comment: C: How To Extract A Sequence From A Big (6Gb) Multifasta File ?
6.3 years ago by al-ash ▴ 200
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7
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4.4k
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"Optimal" setting of CPU and max_memory in Trinity
Trinity CPU RAM
updated 6.4 years ago by • 0 • written 6.7 years ago by ▴ 200
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Answer: A: How to download raw sequence data from GEO/SRA
6.6 years ago by al-ash ▴ 200
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4.4k
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Comment: C: "Optimal" setting of CPU and max_memory in Trinity
6.7 years ago by al-ash ▴ 200
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1
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4.4k
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Comment: C: "Optimal" setting of CPU and max_memory in Trinity
6.7 years ago by al-ash ▴ 200
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0
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1.8k
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Comment: C: InterProScan standalone - error connected to non-unique fasta identifiers
6.7 years ago by al-ash ▴ 200
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2
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1.8k
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InterProScan standalone - error connected to non-unique fasta identifiers
InterProScan nucleic acid non-unique identifier
6.7 years ago by al-ash ▴ 200
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1
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3.0k
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Comment: C: Inconsistency between htseq-count output sorted by position or by name
6.8 years ago by al-ash ▴ 200
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1
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6.7k
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Comment: C: Extract exon and splice site information from gff files for HISAT analysis
6.8 years ago by al-ash ▴ 200
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4
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3.8k
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Entrez Direct E-utilities - using match and xtract to filter by data value
Entrez Direct E-utilities match xtract
updated 6.9 years ago by ▴ 330 • written 7.0 years ago by ▴ 200
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Comment: C: Entrez Direct E-utilities - using match and xtract to filter by data value
7.0 years ago by al-ash ▴ 200
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0
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3.8k
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Comment: A: Entrez Direct E-utilities - using match and xtract to filter by data value
7.0 years ago by al-ash ▴ 200
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5.8k
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Comment: C: [share] Script to bulk retrieve DNA sequences by protein IDs from GenBank
7.0 years ago by al-ash ▴ 200
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9
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5.2k
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How to append strings (from one file) to Fasta headers (in another file)
bioawk FASTA header append
updated 7.0 years ago by 21k • written 7.0 years ago by ▴ 200
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5.2k
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Comment: C: How to append strings (from one file) to Fasta headers (in another file)
7.0 years ago by al-ash ▴ 200
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0
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5.2k
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Comment: C: How to append strings (from one file) to Fasta headers (in another file)
7.0 years ago by al-ash ▴ 200
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1
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5.2k
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Comment: C: How to append strings (from one file) to Fasta headers (in another file)
7.0 years ago by al-ash ▴ 200
0
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1
reply
5.2k
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Comment: C: How to append strings (from one file) to Fasta headers (in another file)
7.0 years ago by al-ash ▴ 200
0
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0
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16k
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Comment: C: How To Add Specific Word To Fasta Header
7.0 years ago by al-ash ▴ 200
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7.8k
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Comment: C: Entrez direct E-utilities - "efetch" command to retrieve CDS with protein access
7.0 years ago by al-ash ▴ 200
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4.6k
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Comment: C: Batch download of protein FASTAs from GenBank using a list (>100) of protein acc
7.0 years ago by al-ash ▴ 200
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3
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4.6k
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Batch download of protein FASTAs from GenBank using a list (>100) of protein accessions
genbank FASTA E-utils
updated 7.1 years ago by ▴ 40 • written 7.1 years ago by ▴ 200
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