User: josh.singer

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Posts by josh.singer

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Comment: C: NCBI / Entrez eSearch via HTTP POST
... Yes, that also works.  I guess that answers the question.  I also found you can do this: curl   "http://eutils.ncbi.nlm.nih.gov/entrez/eutils/esearch.fcgi?db=nuccore" -d 'term="Hepatitis C"[Organism] AND 7000:10000[SLEN]' which is good because this allows me to pass through the term without tran ...
written 3.8 years ago by josh.singer0
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Comment: C: NCBI / Entrez eSearch via HTTP POST
... Yes, that does work. I'm using entrez as a programmatic API, rather than from a web UI. Currently I'm encoding the search terms in the URL, like this: http://eutils.ncbi.nlm.nih.gov/entrez/eutils/esearch.fcgi?db=nuccore&term=Hepatitis%20C[Organism]+AND+7000:10000[SLEN] What I was hoping was t ...
written 3.8 years ago by josh.singer0
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NCBI / Entrez eSearch via HTTP POST
... ESearch is the Entrez method for searching the NCBI databases including NucCore / GenBank. In the documentation for Entrez/ESearch it mentions: "Entrez text query. All special characters must be URL encoded. Spaces may be replaced by '+' signs. For very long queries (more than several hundred char ...
ncbi esearch entrez written 3.8 years ago by josh.singer0 • updated 3.8 years ago by Pierre Lindenbaum118k

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