User: hihi.joshi

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hihi.joshi0
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Posts by hihi.joshi

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Calculating coverage for WGS, WES and RNASeq
... Hi, I need some advise on calculating coverage Basically for a set of BAM files, WGS, WES and RNA-Seq - I am interested in calculating and representing coverage - to show the contrast between these differing sequencing techniques (and limited to that ... not comparison). The coverage needs to be c ...
wgs sequence coverage wes rna-seq written 7 days ago by hihi.joshi0 • updated 7 days ago by Philipp Bayer4.6k
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Appropriate application of RPKM
... Hi, Would appreciate any advice on this particular topic... Having seen examples of RPKM calculations and what they signify - I'm not entirely clear whether it's an appropriate metric for exome sequencing coverage. From what I understand, it's appropriate when trying to compare relative transcript ...
rpkm wes rna-seq written 15 months ago by hihi.joshi0 • updated 15 months ago by Damian Kao14k

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