Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
1
vote
0
replies
6.7k
views
Comment: C: Is feature selection necessary before dimensional reduction in single-cell analy
6.1 years ago by igor 13k
2
votes
0
replies
3.5k
views
Comment: C: differences between featureCounts and htseq-count
6.1 years ago by igor 13k
1
vote
2
replies
6.7k
views
Answer: A: Is feature selection necessary before dimensional reduction in single-cell analy
6.1 years ago by igor 13k
4
votes
1
reply
42k
views
Comment: C: Seurat DefaultAssay "integrated" or "RNA" with integrated dataset????
6.1 years ago by igor 13k
4
votes
0
replies
2.0k
views
Answer: A: Marker genes for a cell type in ScRNA
6.1 years ago by igor 13k
4
votes
0
replies
42k
views
Answer: A: Seurat DefaultAssay "integrated" or "RNA" with integrated dataset????
6.1 years ago by igor 13k
0
votes
0
replies
1.2k
views
Comment: C: Determining haplotypes with HaplotypeCaller
6.2 years ago by igor 13k
0
votes
0
replies
7.8k
views
Comment: C: Where can I find CCLE RNAseq BAM files?
6.2 years ago by igor 13k
1
vote
0
replies
2.4k
views
Comment: C: Is it necessary to do FastQC before using RSEM?
6.2 years ago by igor 13k
0
votes
1
reply
2.7k
views
Answer: A: variant calling using pseudoaligners
6.2 years ago by igor 13k
0
votes
0
replies
2.9k
views
Comment: C: What is the "state of the art" in gene set analysis in 2019?
6.2 years ago by igor 13k
1
vote
1
reply
2.2k
views
Comment: C: converting SRA to Fastq file by fastq-dump
6.2 years ago by igor 13k
2
votes
0
replies
2.3k
views
Answer: A: Seurat Integrated Analysis (RunMultiCCA)
6.2 years ago by igor 13k
0
votes
1
reply
2.2k
views
Comment: C: converting SRA to Fastq file by fastq-dump
6.2 years ago by igor 13k
0
votes
0
replies
2.1k
views
Answer: A: Isoform level TCGA RNA-seq Expression data
6.2 years ago by igor 13k
0
votes
1
reply
3.5k
views
Comment: C: Computing the significance of overlapping ChIP-seq peaks
6.2 years ago by igor 13k
0
votes
1
reply
5.8k
views
Comment: C: Adapter trimming before mapping with Salmon
6.2 years ago by igor 13k
7
votes
1
reply
5.8k
views
Answer: A: Adapter trimming before mapping with Salmon
6.2 years ago by igor 13k
3
votes
0
replies
21k
views
Answer: A: How to download dbSNP153 vcf files in hg19/GRCH37 version
6.2 years ago by igor 13k
0
votes
1
reply
4.5k
views
Comment: C: How to filter GTF file and only print lines where the tag is a certain value?
6.2 years ago by igor 13k
0
votes
0
replies
3.3k
views
Comment: C: How to append R1(Barcode+UMI) to header of R2(Read data)
6.2 years ago by igor 13k
3
votes
1
reply
1.9k
views
Answer: A: How to know whether identified mutation signatures from my data are listed in CO
6.2 years ago by igor 13k
0
votes
0
replies
1.5k
views
Comment: C: Analyzing VCF file
6.2 years ago by igor 13k
0
votes
0
replies
2.5k
views
Comment: C: Library size normalization during CNV calling from genomically doubled tumor tis
6.3 years ago by igor 13k
0
votes
1
reply
2.5k
views
Comment: C: Library size normalization during CNV calling from genomically doubled tumor tis
6.3 years ago by igor 13k
0
votes
1
reply
2.5k
views
Comment: C: Library size normalization during CNV calling from genomically doubled tumor tis
6.3 years ago by igor 13k
4
votes
1
reply
16k
views
Answer: A: How to tell which transcript is the canonical transcript?
6.3 years ago by igor 13k
1
vote
0
replies
2.1k
views
Answer: A: Why does every database have a different set of exons for TP53 (and other genes)
6.3 years ago by igor 13k
0
votes
1
reply
3.1k
views
Comment: C: How to retrieve VCF of C. elegans and D. melanogaster
6.3 years ago by igor 13k
2
votes
1
reply
3.1k
views
Comment: C: How to retrieve VCF of C. elegans and D. melanogaster
6.3 years ago by igor 13k
0
votes
0
replies
4.7k
views
Comment: C: clusterprofiler GSEA function no term enriched under specific pvalueCutoff...
6.3 years ago by igor 13k
0
votes
0
replies
8.9k
views
Answer: A: What batch correction was applied to pan-Cancer mRNA expression data?
6.3 years ago by igor 13k
0
votes
1
reply
3.3k
views
Comment: C: How to append R1(Barcode+UMI) to header of R2(Read data)
6.3 years ago by igor 13k
0
votes
1
reply
3.3k
views
Comment: C: How to append R1(Barcode+UMI) to header of R2(Read data)
6.3 years ago by igor 13k
0
votes
0
replies
2.5k
views
Comment: C: Right MongoDB approach for a multigenomic database?
6.3 years ago by igor 13k
1
vote
0
replies
1.5k
views
Comment: C: Mouse RNA-seq research
6.3 years ago by igor 13k
0
votes
0
replies
15k
views
Comment: C: Faster BLAST alternative
6.3 years ago by igor 13k
0
votes
0
replies
3.2k
views
Comment: C: Empty VCF files produced by both Mutect2 and HaplotypeCaller?
6.3 years ago by igor 13k
1
vote
1
reply
2.2k
views
Comment: C: Ideas on how to evaluate genomic coordinates remapping tools?
6.3 years ago by igor 13k
0
votes
0
replies
3.4k
views
Comment: C: Mutect2 (GATK4, Java8) outputs empty VCF file for tumor only mode
6.3 years ago by igor 13k
0
votes
1
reply
2.2k
views
Comment: C: Ideas on how to evaluate genomic coordinates remapping tools?
6.3 years ago by igor 13k
0
votes
1
reply
2.2k
views
Comment: C: Ideas on how to evaluate genomic coordinates remapping tools?
6.3 years ago by igor 13k
1
vote
1
reply
2.5k
views
Comment: C: Right MongoDB approach for a multigenomic database?
6.3 years ago by igor 13k
1
vote
1
reply
2.5k
views
Comment: C: Right MongoDB approach for a multigenomic database?
6.3 years ago by igor 13k
1
vote
0
replies
3.4k
views
Comment: C: Mutect2 (GATK4, Java8) outputs empty VCF file for tumor only mode
6.3 years ago by igor 13k
4
votes
0
replies
5.8k
views
Answer: A: scRNAseq: Split FASTQ into cell specific FASTQ Files
6.3 years ago by igor 13k
1
vote
0
replies
7.3k
views
Comment: C: Fixing batch effect with seurat integrate
6.3 years ago by igor 13k
0
votes
1
reply
7.3k
views
Comment: C: Fixing batch effect with seurat integrate
6.3 years ago by igor 13k
0
votes
1
reply
3.4k
views
Comment: C: GATK SplitNCigarReads Error
6.3 years ago by igor 13k
1
vote
0
replies
1.4k
views
Answer: A: Help regarding RNAseq data analysis.
6.3 years ago by igor 13k
1,531 results • Page 11 of 31
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6