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2
votes
1
reply
4.6k
views
Answer: C: Bowtie2 hg19 reference for gatk MuTect
6.3 years ago by igor 13k
0
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1
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4.6k
views
Comment: C: Bowtie2 hg19 reference for gatk MuTect
6.4 years ago by igor 13k
2
votes
1
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22k
views
Answer: A: Using SCTransform with Seurat for multi-sample RNA-seq data
6.4 years ago by igor 13k
2
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0
replies
22k
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Comment: C: Using SCTransform with Seurat for multi-sample RNA-seq data
6.4 years ago by igor 13k
3
votes
0
replies
1.7k
views
Comment: C: How to find which genes are transcriptional factors from a list of genes?
6.4 years ago by igor 13k
1
vote
1
reply
22k
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Comment: C: Using SCTransform with Seurat for multi-sample RNA-seq data
6.4 years ago by igor 13k
1
vote
1
reply
22k
views
Comment: C: Using SCTransform with Seurat for multi-sample RNA-seq data
6.4 years ago by igor 13k
1
vote
0
replies
5.0k
views
Comment: C: Merging Seurat objects together and gene alignment
6.4 years ago by igor 13k
2
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1
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6.2k
views
Answer: A: Insert Size Metrics of ATAC-Seq data
6.4 years ago by igor 13k
1
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0
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5.4k
views
Comment: C: Creating SingleCellExperiment class from scratch !
6.4 years ago by igor 13k
5
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0
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8.6k
views
Answer: A: Seurat vs Monocle
6.4 years ago by igor 13k
3
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1
reply
4.2k
views
Answer: A: Visualizing gene density along the chromosome
6.4 years ago by igor 13k
0
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0
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2.0k
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Comment: C: Imputation of scRNA-seq data
6.4 years ago by igor 13k
0
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0
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9.5k
views
Comment: C: How to extract exon sequences from annotated genome
6.4 years ago by igor 13k
0
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1
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19k
views
Comment: C: Associating VDJ clonotyping data with scRNA-seq in Seurat
6.4 years ago by igor 13k
0
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0
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6.4k
views
Comment: C: Demultiplexing bcl files into fastq files
updated 6.5 years ago by 45k • written 8.2 years ago by 13k
1
vote
1
reply
2.6k
views
Comment: C: How can I do in GTAK downstream analysis?
6.6 years ago by igor 13k
0
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1
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6.1k
views
Comment: C: bowtie (1) 0% alignment on paired-end RNAseq data
6.6 years ago by igor 13k
1
vote
0
replies
25k
views
Comment: C: How to create a heatmap of RNA-Seq Data in R?
6.6 years ago by igor 13k
0
votes
0
replies
4.5k
views
Comment: C: DESeq2: unable to allocate memory error
6.6 years ago by igor 13k
2
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0
replies
1.8k
views
Answer: A: Binary mutation data format
6.6 years ago by igor 13k
0
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0
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13k
views
Comment: C: scRNA-seq, SEURAT, NormalizeData, ScaleData, PCA, CCA ...
6.6 years ago by igor 13k
8
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3
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13k
views
Answer: A: scRNA-seq, SEURAT, NormalizeData, ScaleData, PCA, CCA ...
6.6 years ago by igor 13k
1
vote
3
replies
12k
views
Comment: C: Middle author, but not first author projects. How would you approach this?
6.6 years ago by igor 13k
2
votes
1
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12k
views
Comment: C: Middle author, but not first author projects. How would you approach this?
6.6 years ago by igor 13k
3
votes
0
replies
7.0k
views
Comment: C: Download hundreds of genes' variant csv from gnomAD
6.6 years ago by igor 13k
1
vote
0
replies
2.4k
views
Comment: C: Is there a tutorial on pathway enrichment analysis in R without ready-made packa
6.6 years ago by igor 13k
0
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0
replies
4.1k
views
Comment: C: Z score heat map online tool
6.6 years ago by igor 13k
0
votes
0
replies
1.9k
views
Comment: C: GATK best practice step-by-step command lines for Arabidopsis DNA-Seq data analy
6.6 years ago by igor 13k
0
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1
reply
4.1k
views
Comment: C: Z score heat map online tool
6.6 years ago by igor 13k
0
votes
0
replies
4.2k
views
Comment: C: ExAC non-TCGA mean
6.6 years ago by igor 13k
2
votes
1
reply
4.2k
views
Answer: A: ExAC non-TCGA mean
6.6 years ago by igor 13k
1
vote
1
reply
6.2k
views
Comment: C: GATK failing to find any variants - how to troubleshoot?
6.6 years ago by igor 13k
5
votes
1
reply
5.7k
views
Answer: A: RNA-seq: is there a way to get the variability between biological replicates ?
6.6 years ago by igor 13k
0
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1
reply
6.2k
views
Comment: C: GATK failing to find any variants - how to troubleshoot?
6.6 years ago by igor 13k
0
votes
0
replies
1.4k
views
Comment: C: How many SNPs I should expect to see in a normal human embryonic stem cell (hESC
6.6 years ago by igor 13k
0
votes
1
reply
6.2k
views
Comment: C: GATK failing to find any variants - how to troubleshoot?
6.6 years ago by igor 13k
1
vote
1
reply
6.2k
views
Comment: C: GATK failing to find any variants - how to troubleshoot?
6.6 years ago by igor 13k
0
votes
0
replies
8.9k
views
Comment: C: CellCycleScoring in Seurat with custom cell-cycle gene list
6.7 years ago by igor 13k
1
vote
0
replies
5.7k
views
Answer: A: Insert size of -20bp with ATAC-seq?
6.7 years ago by igor 13k
2
votes
1
reply
7.1k
views
Comment: C: low unique mapping ratio of RNA-seq data
6.7 years ago by igor 13k
4
votes
1
reply
24k
views
Answer: A: TPM values of expressed genes
6.7 years ago by igor 13k
1
vote
0
replies
3.0k
views
Answer: A: why is variant calling difficult?
6.7 years ago by igor 13k
4
votes
2
replies
7.4k
views
Answer: A: normalization in single cell RNAseq
6.7 years ago by igor 13k
1
vote
0
replies
1.6k
views
Comment: C: Too many distinct mutations in matched normal and cancer cells
6.8 years ago by igor 13k
14
votes
5
replies
11k
views
smoothing or binning bigWig file
bigwig
updated 2.6 years ago by ▴ 40 • written 8.9 years ago by 13k
1
vote
0
replies
6.3k
views
Comment: C: How to perform GSEAPreranked analysis in a proper manner?
6.8 years ago by igor 13k
1
vote
0
replies
2.9k
views
Answer: A: VarScan: How is the DP score in a .vcf calculated?
6.8 years ago by igor 13k
0
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0
replies
8.2k
views
Comment: C: TCGA expression data (TPM)
6.8 years ago by igor 13k
0
votes
0
replies
8.2k
views
Comment: C: TCGA expression data (TPM)
6.8 years ago by igor 13k
1,531 results • Page 12 of 31
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