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Answer:
Answer: scRNA cluster mapping comparision derived from two different analysis
17 months ago by
igor
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605
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Answer:
Answer: Msigdb GO:BP
22 months ago by
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Answer:
Answer: scRNA-seq doublets with less features and UMIs than singlets? How?
2.3 years ago by
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580
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Answer:
Answer: Does Haplotypecaller of GATK find all the mutations?
2.4 years ago by
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Answer:
Answer: Calculation of gene coverage from BAM file
2.4 years ago by
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19k
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Answer:
Answer: Cell Type Marker Databases?
2.4 years ago by
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2.2k
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Answer:
Answer: ScarHRD
2.5 years ago by
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2
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3.6k
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Answer:
Answer: Can I perform scRNAseq data integration without loosing features?
2.7 years ago by
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Answer:
A: Annotate PBMC scRNA-seq data
3.2 years ago by
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1.8k
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Answer:
A: Using seurat FindClusters on the tSNE embeddings
3.2 years ago by
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Answer:
A: Pros/cons of cell hashing
3.3 years ago by
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Answer:
A: Why does it make sense to use gene symbols instead of gene ids in enrichment sof
3.3 years ago by
igor
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798
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Answer:
A: <5 genes as markers for scRNA Cluster?
3.3 years ago by
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3.9k
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Answer:
A: Integrating two Seurat Objects
3.3 years ago by
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Answer:
A: Estimation of Copy Number of alterations(CNA) in Sc-RNA Seq data
3.3 years ago by
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606
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Answer:
A: Do different cells transcribe different amounts of gene data?
3.3 years ago by
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2
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687
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Answer:
A: "Bias" in NGS sequencing processing
3.3 years ago by
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Answer:
A: GDC TCGA LUAD dataset iCluster.group parameter
3.3 years ago by
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4.7k
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Answer:
A: RNAseq RSEM and featurecounts
3.4 years ago by
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1
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1.5k
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Answer:
A: Tools for hard trimming?
3.4 years ago by
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2
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1
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1.9k
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Answer:
A: Applying batch correction to single-cell RNA-seq in diffferent time points
3.6 years ago by
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770
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Answer:
A: Detecting aneuploidy in sequencing data or copy number profile?
3.6 years ago by
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2.2k
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Answer:
C: Paired end sequencing in case of a short biological insert
3.6 years ago by
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0
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810
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Answer:
A: nags.plot.r outputs flat graphs and no results
3.7 years ago by
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1
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1.8k
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Answer:
C: How to compare VCF files called from different reference genomes?
3.7 years ago by
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2
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1
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663
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Answer:
A: 10X single-cell Seuart object
3.7 years ago by
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2.4k
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Answer:
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3
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1
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14k
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Answer:
A: Cluster sub-set analysis using Seurat
3.7 years ago by
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13k
1
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1
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808
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Answer:
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3.7 years ago by
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10k
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Answer:
A: Detecting copy number alterations based on RNA-seq data
3.7 years ago by
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2
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2.2k
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Answer:
A: mouse chrY centromere location
3.7 years ago by
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3
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1.2k
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Answer:
A: How to find out p-value format in chip-seq .bed files from GEO
3.8 years ago by
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13k
2
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686
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Answer:
C: Differences when genome assembly changes in Kallisto
3.8 years ago by
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13k
0
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909
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A: How to generate high-resolution genome track?
3.8 years ago by
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13k
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961
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Answer:
A: Identifying appearance or disappearance of cell populations between WT and Mut s
3.8 years ago by
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13k
3
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3
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3.7k
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Answer:
A: SingleR for integrated scRNA-seq analysis
3.8 years ago by
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13k
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4.8k
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Answer:
A: retrieve TPM matrix from raw counts matrix or DESeq2 object dds
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2
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1
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1.4k
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Answer:
A: KEGG pathway gene lists differ between sources
3.8 years ago by
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13k
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Answer:
A: Using limma for scRNAseq data
3.9 years ago by
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13k
1
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1
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4.6k
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Answer:
A: best STAR options for miRNA mapping?
3.9 years ago by
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13k
2
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2.5k
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Answer:
A: GSEA and IPA: alternative or complementary?
3.9 years ago by
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2
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Answer:
A: identify highly mutated regions in WES/WGS samples
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Answer:
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3
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1.1k
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Answer:
A: How to subset DESeq2 results
3.9 years ago by
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1.2k
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Answer:
A: Mapping canine whole genome sequencing to camfam3 reference genome on BWA-MEM
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Answer:
A: 10x Single cell data analysis with Monocle
3.9 years ago by
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Answer:
A: Is there a single cell RNAseq equivalent of GTEx or TCGA?
3.9 years ago by
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13k
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12k
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Answer:
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3.9 years ago by
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1
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1
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Answer:
A: RNA-seq data for binary classification problem
3.9 years ago by
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13k
2
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Answer:
A: Which programming langauge shall I start as a beginner in Bioinformatics
3.9 years ago by
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13k
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