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questions
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549
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Read distribution tool accounting for read orientation
RNA
3.8 years ago by
VHahaut
★ 1.2k
3
votes
3
replies
2.3k
views
Potential Bacteria Contamination - RNA-Seq
RNA-Seq
metagenomics
updated 4.5 years ago by
Thind amarinder
▴ 340 • written 4.7 years ago by
VHahaut
★ 1.2k
1
vote
0
replies
1.2k
views
scRNA compare gene set enrichment between clusters
scRNA
4.6 years ago by
VHahaut
★ 1.2k
2
votes
4
replies
3.4k
views
Nucleotide per-position from bam file and filter on quality
SNP
updated 4.7 years ago by
khalilard
• 0 • written 8.8 years ago by
VHahaut
★ 1.2k
0
votes
0
replies
1.0k
views
Nanopore incomplete fragment sequencing
nanopore
updated 5.4 years ago by
Biostar
20 • written 5.5 years ago by
VHahaut
★ 1.2k
0
votes
0
replies
1.2k
views
Power Analysis 10x - Minimum number cells per cluster
10x
scRNA
5.5 years ago by
VHahaut
★ 1.2k
0
votes
1
reply
5.1k
views
Minimap2: supplementary alignment PAF
minimap2
updated 6.5 years ago by
lolec
▴ 20 • written 6.9 years ago by
VHahaut
★ 1.2k
1
vote
1
reply
1.5k
views
Differential expression: High variability inter-samples
DESeq2
edgeR
limma
6.9 years ago by
VHahaut
★ 1.2k
9
votes
5
replies
3.4k
views
ERCC count matrix smart-seq2
RNA-Seq
updated 7.5 years ago by
Charles Plessy
★ 2.9k • written 7.5 years ago by
VHahaut
★ 1.2k
1
vote
0
replies
2.0k
views
karyoploteR: custom genome axis $latest.plot
karyoploteR
R
updated 7.7 years ago by
Biostar
20 • written 7.8 years ago by
VHahaut
★ 1.2k
0
votes
1
reply
1.9k
views
Full chromosome aneuploidy detection
genome
aneuploidy
updated 7.9 years ago by
Wayne
★ 2.1k • written 8.2 years ago by
VHahaut
★ 1.2k
1
vote
2
replies
2.5k
views
bwa: RNAME of chimeric reads in sam file
bwa
updated 8.7 years ago by
Pierre Lindenbaum
166k • written 8.7 years ago by
VHahaut
★ 1.2k
1
vote
1
reply
2.6k
views
Conversion sheep/mammal ID to human for GSEA
ID
GSEA
orthology
updated 2.7 years ago by
Ram
45k • written 9.3 years ago by
VHahaut
★ 1.2k
0
votes
3
replies
4.5k
views
DESeq2: Continous values
DESeq2
R
Design
updated 2.6 years ago by
Ram
45k • written 9.6 years ago by
VHahaut
★ 1.2k
6
votes
5
replies
5.8k
views
MA plots DESeq: strange MA plots
RNA-Seq
MAplot
DESeq
updated 2.4 years ago by
Ram
45k • written 9.8 years ago by
VHahaut
★ 1.2k
7
votes
2
replies
8.3k
views
DESeq2 analysis: huge number of outliers and refitting
RNA-Seq
R
DESeq
updated 2.4 years ago by
Ram
45k • written 9.8 years ago by
VHahaut
★ 1.2k
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