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2
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870
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Comment: Comment: How to make line graph with circles in R
13 months ago by Chirag Parsania ★ 2.0k
0
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0
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341
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miRNA KD/KO data in public domain
public-data miRNA
14 months ago by Chirag Parsania ★ 2.0k
0
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0
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593
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Comment: Comment: Fungal database or gene catalog
14 months ago by Chirag Parsania ★ 2.0k
1
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0
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427
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Tool: FungiExpresZ: an intuitive package for fungal gene expression data analysis, visualization and discovery
r gene-expression RNA-seq fungi
updated 13 months ago by 43k • written 14 months ago by ★ 2.0k
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0
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5.3k
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Comment: Comment: Write excel file formatted as Table in R
19 months ago by Chirag Parsania ★ 2.0k
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0
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2.2k
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Answer: Answer: Filter genes of interest from GTF file on R
2.1 years ago by Chirag Parsania ★ 2.0k
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0
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1.2k
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Comment: Comment: biomart and rtracklayer
2.1 years ago by Chirag Parsania ★ 2.0k
0
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0
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485
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Comment: Comment: How to visualize ranked gene expression across samples for RNA-seq?
2.2 years ago by Chirag Parsania ★ 2.0k
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0
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1.0k
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Comment: Comment: generate all combinations of strings from regular expression in R
2.3 years ago by Chirag Parsania ★ 2.0k
1
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2
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1.0k
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generate all combinations of strings from regular expression in R
regularexpression R
2.3 years ago by Chirag Parsania ★ 2.0k
3
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1
reply
765
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Bioconductor package specific website
Bioconductor Rstats R
updated 2.7 years ago by ★ 1.2k • written 2.7 years ago by ★ 2.0k
5
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2
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651
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NCBI genome stats
genome stats ncbi
updated 3.1 years ago by 141k • written 3.1 years ago by ★ 2.0k
0
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0
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1.0k
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Comment: C: Looking for Bioinformatician in Neuroscience to PORT Polish Center for Technolog
3.6 years ago by Chirag Parsania ★ 2.0k
1
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1
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1.5k
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Comment: C: Gene Ontology Database
3.7 years ago by Chirag Parsania ★ 2.0k
0
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2
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1.2k
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Comment: C: Get summary of aligned sequences
3.9 years ago by Chirag Parsania ★ 2.0k
0
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1
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1.2k
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Comment: C: Get summary of aligned sequences
3.9 years ago by Chirag Parsania ★ 2.0k
1
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6
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1.2k
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Get summary of aligned sequences
sequence alignment fasta
3.9 years ago by Chirag Parsania ★ 2.0k
0
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0
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800
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Comment: C: plot tss profile
4.0 years ago by Chirag Parsania ★ 2.0k
5
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0
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1.1k
views
Tool: TidyWrappers : an R package to deal with an object tbl
ChIP-Seq wrappers R RNA-Seq gene-expression
updated 10 months ago by 43k • written 4.0 years ago by ★ 2.0k
1
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0
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603
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Comment: C: Empty .fa file after fa_some_records
4.0 years ago by Chirag Parsania ★ 2.0k
0
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0
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1.6k
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Comment: C: Reading a tab separated file
4.0 years ago by Chirag Parsania ★ 2.0k
0
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0
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882
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Comment: C: Removal of sequences that is partial of a longer sequences in multifasta file
4.0 years ago by Chirag Parsania ★ 2.0k
2
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1
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2.8k
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Answer: A: Qcov Vs QcovHSP
4.0 years ago by Chirag Parsania ★ 2.0k
0
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0
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3.1k
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Comment: C: FASTA file split
4.1 years ago by Chirag Parsania ★ 2.0k
0
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0
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952
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Comment: C: How to get the response variable from gbm model when train.fraction is <1 ?
4.1 years ago by Chirag Parsania ★ 2.0k
0
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1
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1.1k
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Comment: C: NGSseq heatmap RStudio
4.1 years ago by Chirag Parsania ★ 2.0k
0
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1
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1.8k
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Comment: C: How to check quality of multiple sequence alignment (MSA)?
4.1 years ago by Chirag Parsania ★ 2.0k
1
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3
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1.8k
views
How to check quality of multiple sequence alignment (MSA)?
MSA multiple-sequence-alignment R
updated 11 months ago by 43k • written 4.1 years ago by ★ 2.0k
1
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1
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1.6k
views
Answer: Answer: How to check for the presence/absence of unique rows in two different matrices?
4.2 years ago by Chirag Parsania ★ 2.0k
1
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0
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4.5k
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Answer: A: How to get Taxonomy and Taxon ID for an Accession number using R/Python?
4.2 years ago by Chirag Parsania ★ 2.0k
0
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0
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9.9k
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Comment: C: MrBayes: Implementing the LG model
4.3 years ago by Chirag Parsania ★ 2.0k
3
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1
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3.6k
views
Answer: A: Is there any differences between tophat, cufflinks command with and without GTF
updated 4.4 years ago by 43k • written 8.4 years ago by ★ 2.0k
0
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1
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4.1k
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Comment: C: Should I filter my reads before running bedtools multicov ?
updated 4.4 years ago by 43k • written 8.4 years ago by ★ 2.0k
0
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1
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4.1k
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Comment: C: Should I filter my reads before running bedtools multicov ?
updated 4.4 years ago by 43k • written 8.4 years ago by ★ 2.0k
0
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0
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1.8k
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Answer: A: Data Vizualization or Pathway Analysis
updated 4.4 years ago by 43k • written 8.4 years ago by ★ 2.0k
1
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1
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1.3k
views
Answer: A: Obtaining nucleotide sequences from a set of protein identifiers
4.4 years ago by Chirag Parsania ★ 2.0k
0
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0
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7.9k
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Comment: C: How to find intron co-ordinates from the gff file?
updated 4.4 years ago by 43k • written 8.4 years ago by ★ 2.0k
0
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1
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7.9k
views
Comment: C: How to find intron co-ordinates from the gff file?
updated 4.4 years ago by 43k • written 8.4 years ago by ★ 2.0k
0
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0
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7.9k
views
Comment: C: How to find intron co-ordinates from the gff file?
updated 4.4 years ago by 43k • written 8.4 years ago by ★ 2.0k
0
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0
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2.0k
views
Comment: C: Data with only 1 pair for DEG analysis
updated 4.4 years ago by 43k • written 8.5 years ago by ★ 2.0k
0
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1
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2.0k
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Comment: C: Data with only 1 pair for DEG analysis
updated 4.4 years ago by 43k • written 8.5 years ago by ★ 2.0k
0
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1
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2.0k
views
Answer: A: Data with only 1 pair for DEG analysis
updated 4.4 years ago by 43k • written 8.5 years ago by ★ 2.0k
1
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1
reply
7.9k
views
Comment: C: Plotting a line graph using the ggplot2 for multiple columns (genes)
4.4 years ago by Chirag Parsania ★ 2.0k
1
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1
reply
7.9k
views
Comment: C: Plotting a line graph using the ggplot2 for multiple columns (genes)
4.4 years ago by Chirag Parsania ★ 2.0k
1
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0
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1.9k
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Answer: A: Extract sequences consecutively from a large fasta files and save in new fasta f
4.4 years ago by Chirag Parsania ★ 2.0k
0
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0
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1.1k
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Comment: C: Mapping common identifiers between two files
4.4 years ago by Chirag Parsania ★ 2.0k
6
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2
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1.5k
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Answer: A: How can I separate column names in to different columns to perform downstream an
4.5 years ago by Chirag Parsania ★ 2.0k
8
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1
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17k
views
Answer: C: Could you please explain Fold change, % of change, and log2 fold change (L2FC) t
4.5 years ago by Chirag Parsania ★ 2.0k
2
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1
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2.0k
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Answer: C: ggplot density plot across bed file
updated 4.6 years ago by 11k • written 4.6 years ago by ★ 2.0k
5
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1
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1.4k
views
Answer: A: Plotting genes in terms of fold change in different grouping
4.6 years ago by Chirag Parsania ★ 2.0k
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