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Answer: Answer: Filter genes of interest from GTF file on R
2.5 years ago by Chirag Parsania ★ 2.0k
2
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1
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3.0k
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Answer: A: Qcov Vs QcovHSP
4.4 years ago by Chirag Parsania ★ 2.0k
1
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1
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1.7k
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Answer: Answer: How to check for the presence/absence of unique rows in two different matrices?
4.6 years ago by Chirag Parsania ★ 2.0k
1
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4.8k
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Answer: A: How to get Taxonomy and Taxon ID for an Accession number using R/Python?
4.6 years ago by Chirag Parsania ★ 2.0k
3
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1
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3.8k
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Answer: A: Is there any differences between tophat, cufflinks command with and without GTF
updated 4.8 years ago by 44k • written 8.8 years ago by ★ 2.0k
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Answer: A: Data Vizualization or Pathway Analysis
updated 4.8 years ago by 44k • written 8.8 years ago by ★ 2.0k
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1.4k
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Answer: A: Obtaining nucleotide sequences from a set of protein identifiers
4.8 years ago by Chirag Parsania ★ 2.0k
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1
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2.2k
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Answer: A: Data with only 1 pair for DEG analysis
updated 4.8 years ago by 44k • written 8.8 years ago by ★ 2.0k
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0
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2.2k
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Answer: A: Extract sequences consecutively from a large fasta files and save in new fasta f
4.8 years ago by Chirag Parsania ★ 2.0k
6
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2
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1.6k
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Answer: A: How can I separate column names in to different columns to perform downstream an
4.9 years ago by Chirag Parsania ★ 2.0k
8
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1
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18k
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Answer: C: Could you please explain Fold change, % of change, and log2 fold change (L2FC) t
4.9 years ago by Chirag Parsania ★ 2.0k
2
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1
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2.1k
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Answer: C: ggplot density plot across bed file
updated 5.0 years ago by 12k • written 5.0 years ago by ★ 2.0k
5
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1
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1.5k
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Answer: A: Plotting genes in terms of fold change in different grouping
5.0 years ago by Chirag Parsania ★ 2.0k
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1
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1.9k
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Answer: A: Get cDNA sequences from NCBI for given protein IDs
5.1 years ago by Chirag Parsania ★ 2.0k
2
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1.8k
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Answer: A: select rows with specific columns and values between two data tables ?
5.1 years ago by Chirag Parsania ★ 2.0k
0
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1
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3.5k
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Answer: A: Remove duplicate genes with lower significance in microarray data analysis
5.1 years ago by Chirag Parsania ★ 2.0k
3
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0
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874
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Answer: A: Allowing duplicates when matching values from two tables
5.1 years ago by Chirag Parsania ★ 2.0k
1
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1
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3.3k
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Answer: A: DEseq results -- foldchange is 0/inf
5.2 years ago by Chirag Parsania ★ 2.0k
4
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0
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3.1k
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Answer: A: How to match fasta header list of name?
5.2 years ago by Chirag Parsania ★ 2.0k
4
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1
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2.0k
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Answer: A: How to create a summary statistics data table for omics data?
5.6 years ago by Chirag Parsania ★ 2.0k
2
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2
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6.3k
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Answer: C: how to create a fasta file with subset of sequences using seqinr
5.7 years ago by Chirag Parsania ★ 2.0k
0
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2
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1.8k
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Answer: A: can i used RNA seq normalized data of PAAD, downloaded from TCGA with the help o
5.7 years ago by Chirag Parsania ★ 2.0k
3
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0
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10k
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Answer: A: Add `chr` to first column of specific rows?
5.7 years ago by Chirag Parsania ★ 2.0k
2
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0
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26k
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Answer: A: How to extract rows from data frame with row names in R?
5.7 years ago by Chirag Parsania ★ 2.0k
1
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1
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8.5k
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Answer: A: K-means With Many Clusters: Quick-TRANSfer steps exceeded
5.8 years ago by Chirag Parsania ★ 2.0k
3
votes
2
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1.7k
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Answer: A: How to tidy data with more-than one header, while both headers in long format
5.9 years ago by Chirag Parsania ★ 2.0k
1
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1
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3.4k
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Answer: A: blastn: how to show all query list in my blastn results, even if they have no ma
5.9 years ago by Chirag Parsania ★ 2.0k
1
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0
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1.6k
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Answer: A: How to reformat (i.e. to clean) NCBI .fasta archives into a singleline .fasta wi
5.9 years ago by Chirag Parsania ★ 2.0k
0
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0
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8.9k
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Answer: A: R read.table() saying line does not have correct number of elements - when I che
5.9 years ago by Chirag Parsania ★ 2.0k
0
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0
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1.8k
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Answer: A: how to de-aggregate a table in R
5.9 years ago by Chirag Parsania ★ 2.0k
1
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1
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1.1k
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Answer: C: Merge two comma seperated column in one frame in R
5.9 years ago by Chirag Parsania ★ 2.0k
3
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1
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2.3k
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Answer: A: manipulating a file by R or bash?
5.9 years ago by Chirag Parsania ★ 2.0k
5
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3
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3.7k
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Answer: A: Compare data from two different table using R
5.9 years ago by Chirag Parsania ★ 2.0k
0
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0
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2.5k
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Answer: A: How to make cluster from gene read count?
5.9 years ago by Chirag Parsania ★ 2.0k
6
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3
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13k
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Answer: A: How to make k-means clustering plot for relative expression?
5.9 years ago by Chirag Parsania ★ 2.0k
4
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1
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7.5k
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Answer: C: Reorder heatmap rows in a dataset with missing values
6.2 years ago by Chirag Parsania ★ 2.0k
4
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0
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6.5k
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Answer: A: How to plot heatmap for the matrix for the pairwise comparison of sequence simi
6.3 years ago by Chirag Parsania ★ 2.0k
4
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0
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5.4k
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Answer: A: FASTA file with taxid, want to obtain lineage and put into header
6.3 years ago by Chirag Parsania ★ 2.0k
2
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1
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3.9k
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Answer: A: How to split fastq file contains two different header information
6.3 years ago by Chirag Parsania ★ 2.0k
0
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0
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2.2k
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Answer: A: Phylogeny Tree based on SILVA classification
6.3 years ago by Chirag Parsania ★ 2.0k
0
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0
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2.8k
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Answer: A: p-value calculation when comparing ratios of means (not means of ratios)
6.3 years ago by Chirag Parsania ★ 2.0k
2
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1
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5.2k
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Answer: A: For a given set of NCBI taxonomy ids / species names, how to derive their specie
6.3 years ago by Chirag Parsania ★ 2.0k
3
votes
1
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4.9k
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Answer: A: change seq name in a fasta file with a dataframe
6.4 years ago by Chirag Parsania ★ 2.0k
1
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1
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4.4k
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Answer: C: ggscatter two color issue
7.1 years ago by Chirag Parsania ★ 2.0k
1
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1
reply
2.3k
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Answer: A: Computing 1Gc 2GC 3GC on any CDS
7.1 years ago by Chirag Parsania ★ 2.0k
2
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1
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2.1k
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Answer: A: How to interpret phylogenetic Dendrogram
7.1 years ago by Chirag Parsania ★ 2.0k
1
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0
replies
1.6k
views
Answer: A: how to write scripts to split GO terms as one per line
7.1 years ago by Chirag Parsania ★ 2.0k
2
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1
reply
2.5k
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Answer: A: Interpreting CummeRbund Expression plots
7.1 years ago by Chirag Parsania ★ 2.0k
1
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0
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1.4k
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Answer: A: Tophat and Bowtie2
7.2 years ago by Chirag Parsania ★ 2.0k
2
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1
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2.8k
views
Answer: A: GO enrichment - interpreting broad terms
7.2 years ago by Chirag Parsania ★ 2.0k
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