User: Meenakshi

gravatar for Meenakshi
Meenakshi10
Reputation:
10
Status:
New User
Location:
United States
Last seen:
3 years, 1 month ago
Joined:
3 years, 11 months ago
Email:
m***************@gmail.com

Posts by Meenakshi

<prev • 4 results • page 1 of 1 • next >
0
votes
2
answers
3.0k
views
2
answers
Answer: A: CNA calculation from Segmentation file
... Thank you all for your suggestions and guidance. Based on what I could gather, I am applying different cutoffs on #Probes and Segment length to filter out the noisy data. Using the chosen data , I am calculating Absolute CN using (2^Segment_mean)*2. if the value is >2 it can be considered as a c ...
written 4.0 years ago by Meenakshi10
0
votes
2
answers
3.0k
views
2
answers
Comment: C: CNA calculation from Segmentation file
... Yes, I am trying to calculate the Genome instability index per sample using the CNA from each sample. So, I want to quantify the CNAs using the segmentation file for each sample. Thanks ...
written 4.0 years ago by Meenakshi10
0
votes
2
answers
3.0k
views
2
answers
Comment: C: CNA calculation from Segmentation file
... I added some sample lines from the segmentation file for  your review. Thanks ! ...
written 4.0 years ago by Meenakshi10
12
votes
2
answers
3.0k
views
7 follow
2
answers
CNA calculation from Segmentation file
... Hi I have a compiled  segmentation file (nocnv) for almost 1000 samples. I want to calculate thecopy number aberrations  for all the samples. I tried using GISTIC, but I believe it provides only the consensus copy number variations. Is there a better way to calculate copy number aberration  from s ...
cna copy number segmentation file written 4.0 years ago by Meenakshi10

Latest awards to Meenakshi

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 827 users visited in the last hour