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5
votes
1
reply
3.2k
views
Answer: A: How to bin my count data for the entire genome?
5.5 years ago by Prakash ★ 2.2k
3
votes
0
replies
1.7k
views
Answer: C: Construct a gene co-expression network with WGCNA
5.5 years ago by Prakash ★ 2.2k
3
votes
0
replies
3.3k
views
Answer: A: Gene expression profile analysis
5.6 years ago by Prakash ★ 2.2k
2
votes
1
reply
1.8k
views
Comment: C: How to assign the result of a command to a variable in shell script?
5.6 years ago by Prakash ★ 2.2k
3
votes
1
reply
1.8k
views
Answer: C: How to assign the result of a command to a variable in shell script?
5.6 years ago by Prakash ★ 2.2k
6
votes
0
replies
5.3k
views
Answer: A: How to filter low expressed genes based on TPM expression?
5.6 years ago by Prakash ★ 2.2k
0
votes
1
reply
2.1k
views
Comment: C: Map genes to the ids
5.6 years ago by Prakash ★ 2.2k
0
votes
0
replies
2.2k
views
Comment: C: How can I find the promoter regions that have H3k27me3 in two different groups
5.6 years ago by Prakash ★ 2.2k
0
votes
1
reply
2.2k
views
Comment: C: How can I find the promoter regions that have H3k27me3 in two different groups
5.6 years ago by Prakash ★ 2.2k
0
votes
1
reply
2.2k
views
Comment: C: How can I find the promoter regions that have H3k27me3 in two different groups
5.6 years ago by Prakash ★ 2.2k
1
vote
1
reply
23k
views
Comment: C: How to create a heatmap of RNA-Seq Data in R?
5.7 years ago by Prakash ★ 2.2k
2
votes
0
replies
3.3k
views
Answer: C: venn plot data?
5.7 years ago by Prakash ★ 2.2k
2
votes
0
replies
843
views
Comment: C: How to find transcription factor downstream binding
5.7 years ago by Prakash ★ 2.2k
3
votes
2
replies
5.7k
views
Answer: A: Running GSEA for DEGs
5.7 years ago by Prakash ★ 2.2k
2
votes
0
replies
1.7k
views
Answer: A: Overlap in Peaks of ChIP data for 2 TFs
5.7 years ago by Prakash ★ 2.2k
0
votes
1
reply
2.2k
views
Comment: C: How can I find the promoter regions that have H3k27me3 in two different groups
5.7 years ago by Prakash ★ 2.2k
5
votes
2
replies
2.2k
views
Answer: A: How can I find the promoter regions that have H3k27me3 in two different groups
5.7 years ago by Prakash ★ 2.2k
2
votes
0
replies
9.5k
views
Answer: A: How to highlight certain genes in a Volcano Plot in R
5.7 years ago by Prakash ★ 2.2k
0
votes
0
replies
2.1k
views
Comment: C: Discrepancy in HOMER output
5.7 years ago by Prakash ★ 2.2k
1
vote
1
reply
1.7k
views
Comment: C: Overlap in Peaks of ChIP data for 2 TFs
5.7 years ago by Prakash ★ 2.2k
2
votes
0
replies
14k
views
Comment: C: Complexheatmap annotation legend
5.7 years ago by Prakash ★ 2.2k
1
vote
1
reply
14k
views
Comment: C: Complexheatmap annotation legend
5.7 years ago by Prakash ★ 2.2k
5
votes
4
replies
14k
views
Complexheatmap annotation legend
R rna-seq
5.8 years ago by Prakash ★ 2.2k
0
votes
0
replies
928
views
Comment: C: No called peaks from macse 2 and the alignment rate 90%
5.8 years ago by Prakash ★ 2.2k
1
vote
0
replies
1.4k
views
Comment: C: How to determine fibroblast contamination by expression profile
5.8 years ago by Prakash ★ 2.2k
1
vote
0
replies
5.7k
views
Comment: C: How to perform GSEAPreranked analysis in a proper manner?
5.8 years ago by Prakash ★ 2.2k
5
votes
1
reply
1.4k
views
Answer: A: Filtering, Summerizing, and plotting from big data frame
5.9 years ago by Prakash ★ 2.2k
5
votes
1
reply
3.7k
views
Answer: A: Dividing the groups on the same axis using ggplot2
5.9 years ago by Prakash ★ 2.2k
16
votes
2
replies
20k
views
Answer: A: showing specific GO pathways in the dotplot or cnetplot
5.9 years ago by Prakash ★ 2.2k
0
votes
2
replies
1.9k
views
Comment: C: Differential gene expression in edgeR
5.9 years ago by Prakash ★ 2.2k
3
votes
0
replies
16k
views
Answer: A: Tools To Do the Alternative Splicing Analysis
5.9 years ago by Prakash ★ 2.2k
2
votes
1
reply
1.6k
views
Answer: C: Regular expression to extract mutations type
5.9 years ago by Prakash ★ 2.2k
0
votes
1
reply
1.8k
views
Comment: C: Identify genes with chip signal > input prior to peak calling
5.9 years ago by Prakash ★ 2.2k
0
votes
0
replies
1.7k
views
Comment: C: Strange output of samtools flag stat?
5.9 years ago by Prakash ★ 2.2k
0
votes
1
reply
7.4k
views
Comment: C: How to find out whether Chip-seq peaks falls within promoter or enhancer region
5.9 years ago by Prakash ★ 2.2k
0
votes
2
replies
14k
views
Comment: C: How to make k-means clustering plot for relative expression?
6.1 years ago by Prakash ★ 2.2k
1
vote
1
reply
3.1k
views
Comment: C: Is it possible to visualize ChIP peaks of three different samples in one plot us
6.2 years ago by Prakash ★ 2.2k
1
vote
0
replies
2.0k
views
Comment: C: Finding DE genes in a group compared to all groups
6.2 years ago by Prakash ★ 2.2k
1
vote
1
reply
2.0k
views
Comment: C: Finding DE genes in a group compared to all groups
6.2 years ago by Prakash ★ 2.2k
1
vote
1
reply
20k
views
Comment: C: How different is rlog transformation from vst transformation in DESeq2
6.2 years ago by Prakash ★ 2.2k
0
votes
1
reply
1.6k
views
Comment: C: Plot factors by specific column in ggplot
6.2 years ago by Prakash ★ 2.2k
0
votes
1
reply
1.8k
views
Comment: C: Correlating gene expression with traits for multiple treatments
6.2 years ago by Prakash ★ 2.2k
5
votes
3
replies
3.0k
views
Motif location for enriched motif in HOMER
ChIP-Seq next-gen
updated 6.2 years ago by 148k • written 6.3 years ago by ★ 2.2k
0
votes
1
reply
3.0k
views
Comment: C: Motif location for enriched motif in HOMER
6.2 years ago by Prakash ★ 2.2k
0
votes
1
reply
2.1k
views
Comment: C: Delete numbers in the tables column
updated 6.2 years ago by 12k • written 6.2 years ago by ★ 2.2k
5
votes
1
reply
2.1k
views
Answer: A: Delete numbers in the tables column
updated 6.2 years ago by 12k • written 6.2 years ago by ★ 2.2k
17
votes
0
replies
6.0k
views
Answer: A: How to add gene symbol to RNA-Seq data using R
6.2 years ago by Prakash ★ 2.2k
1
vote
0
replies
2.0k
views
Answer: A: How to extract gene IDs from a tabular file based on a list of locus tags?
6.2 years ago by Prakash ★ 2.2k
2
votes
0
replies
2.2k
views
Comment: C: How to add colors to bar chart?
6.2 years ago by Prakash ★ 2.2k
5
votes
2
replies
2.2k
views
Answer: A: How to add colors to bar chart?
updated 6.2 years ago by 148k • written 6.2 years ago by ★ 2.2k
153 results • Page 2 of 4
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