User: dshulgin

gravatar for dshulgin
dshulgin250
Reputation:
250
Status:
Trusted
Location:
Belarus
Last seen:
11 months, 2 weeks ago
Joined:
2 years, 3 months ago
Email:
u*********@yandex.ru

Posts by dshulgin

<prev • 59 results • page 1 of 6 • next >
0
votes
1
answer
303
views
1
answers
Answer: A: PyCD module python
... https://www.ncbi.nlm.nih.gov/Structure/cdd/cdd_help.shtml#BatchRPSBSearchID1 (then SCRIPTED DATA DOWNLOADS (WEB API) ) Seems like this WEB-API can be useful, but if someone can find something better i would appreciate. ...
written 11 months ago by dshulgin250
0
votes
1
answer
303
views
1
answers
Comment: C: PyCD module python
... If someone knows any useful library in any language to do that, please share. Thanks. ...
written 11 months ago by dshulgin250
0
votes
1
answer
303
views
1
answer
PyCD module python
... Is anyone aware about this module https://github.com/hugadams/PyCD? Can't access home webpage. I'm just looking for some tool or API to search conserved domain like CDART search does. Could anyone help me? Thanks. ...
software error written 11 months ago by dshulgin250
0
votes
0
answers
320
views
0
answers
CDART in biopython or another API
... Hi! I really need some API (in python preferably) that can automize Blast CDART search and give me the results in a convenient format. Thanks a lot. ...
sequence blast written 11 months ago by dshulgin250
0
votes
2
answers
1.2k
views
2
answers
Comment: C: Map of bioinformatics or who is bioinformatician.
... Thanks man. Anything about "map" of bioinformatics? ...
written 12 months ago by dshulgin250
0
votes
2
answers
1.2k
views
2
answers
Comment: C: Map of bioinformatics or who is bioinformatician.
... lol, i really like your attitude, but i'm serious. self-identification questions eat me, that's why i'm trying to get the answers from other people. ...
written 12 months ago by dshulgin250
28
votes
2
answers
1.2k
views
11 follow
2
answers
Forum: Map of bioinformatics or who is bioinformatician.
... Hi, everyone. I know that i've asked lots of, in some way, stupid question, sorry for that. The next one can be a bit boring and has a bit reflection. I'm thinking about how can i say that what i'm really doing is bioinformatics? I mean, i'm 23, work in IT sphere, have been developing web-sites etc. ...
forum general self-study written 12 months ago by dshulgin250 • updated 12 months ago by Istvan Albert ♦♦ 74k
0
votes
0
answers
332
views
0
answers
Comment: C: Get species from Blast or anywhere with Biopython
... Unfortunately we have no ref genome. ...
written 12 months ago by dshulgin250
0
votes
0
answers
332
views
0
answers
Comment: C: Get species from Blast or anywhere with Biopython
... I see, just thought we have more suitable way to do that like i can give "scientific name" and some API can give me taxon. Thanks for your help. ...
written 12 months ago by dshulgin250
1
vote
0
answers
332
views
0
answers
Get species from Blast or anywhere with Biopython
... Hi, everyone. I'm trying to filter out my transcriptome reads the following way: -reads, that might belong to viruses i want to keep saved. -reads, that might be from plants i want to remove from my list. First i try to align every read with blastn with Biopython package. It gives me http://biopy ...
genome blast written 12 months ago by dshulgin250

Latest awards to dshulgin

Popular Question 12 months ago, created a question with more than 1,000 views. For Differences between two SAM/BAM files with samtools
Scholar 14 months ago, created an answer that has been accepted. For A: How to add custom fields to the VCF files?
Teacher 14 months ago, created an answer with at least 3 up-votes. For A: How to add custom fields to the VCF files?
Popular Question 15 months ago, created a question with more than 1,000 views. For Looking for an experience
Commentator 19 months ago, created a comment with at least 3 up-votes. For C: Java or C++ (which side should I choose)
Supporter 24 months ago, voted at least 25 times.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 742 users visited in the last hour