User: dshulgin

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dshulgin250
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250
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Location:
Belarus
Last seen:
7 months, 1 week ago
Joined:
1 year, 11 months ago
Email:
u*********@yandex.ru

Posts by dshulgin

<prev • 59 results • page 1 of 6 • next >
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Answer: A: PyCD module python
... https://www.ncbi.nlm.nih.gov/Structure/cdd/cdd_help.shtml#BatchRPSBSearchID1 (then SCRIPTED DATA DOWNLOADS (WEB API) ) Seems like this WEB-API can be useful, but if someone can find something better i would appreciate. ...
written 7 months ago by dshulgin250
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Comment: C: PyCD module python
... If someone knows any useful library in any language to do that, please share. Thanks. ...
written 7 months ago by dshulgin250
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PyCD module python
... Is anyone aware about this module https://github.com/hugadams/PyCD? Can't access home webpage. I'm just looking for some tool or API to search conserved domain like CDART search does. Could anyone help me? Thanks. ...
software error written 7 months ago by dshulgin250
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CDART in biopython or another API
... Hi! I really need some API (in python preferably) that can automize Blast CDART search and give me the results in a convenient format. Thanks a lot. ...
sequence blast written 7 months ago by dshulgin250
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Comment: C: Map of bioinformatics or who is bioinformatician.
... Thanks man. Anything about "map" of bioinformatics? ...
written 8 months ago by dshulgin250
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Comment: C: Map of bioinformatics or who is bioinformatician.
... lol, i really like your attitude, but i'm serious. self-identification questions eat me, that's why i'm trying to get the answers from other people. ...
written 8 months ago by dshulgin250
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Forum: Map of bioinformatics or who is bioinformatician.
... Hi, everyone. I know that i've asked lots of, in some way, stupid question, sorry for that. The next one can be a bit boring and has a bit reflection. I'm thinking about how can i say that what i'm really doing is bioinformatics? I mean, i'm 23, work in IT sphere, have been developing web-sites etc. ...
forum general self-study written 8 months ago by dshulgin250 • updated 8 months ago by Istvan Albert ♦♦ 73k
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Comment: C: Get species from Blast or anywhere with Biopython
... Unfortunately we have no ref genome. ...
written 8 months ago by dshulgin250
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Comment: C: Get species from Blast or anywhere with Biopython
... I see, just thought we have more suitable way to do that like i can give "scientific name" and some API can give me taxon. Thanks for your help. ...
written 8 months ago by dshulgin250
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Get species from Blast or anywhere with Biopython
... Hi, everyone. I'm trying to filter out my transcriptome reads the following way: -reads, that might belong to viruses i want to keep saved. -reads, that might be from plants i want to remove from my list. First i try to align every read with blastn with Biopython package. It gives me http://biopy ...
genome blast written 8 months ago by dshulgin250

Latest awards to dshulgin

Popular Question 7 months ago, created a question with more than 1,000 views. For Differences between two SAM/BAM files with samtools
Scholar 10 months ago, created an answer that has been accepted. For A: How to add custom fields to the VCF files?
Teacher 10 months ago, created an answer with at least 3 up-votes. For A: How to add custom fields to the VCF files?
Popular Question 11 months ago, created a question with more than 1,000 views. For Looking for an experience
Commentator 15 months ago, created a comment with at least 3 up-votes. For C: Java or C++ (which side should I choose)
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