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3
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808
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Comment: Comment: Bioinformatician who was retaliated against after reporting discriminatory haras
3 days ago by Alex Reynolds 35k
1
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0
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275
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Answer: Answer: How to highlight genes on genome visual reprezentation/what tool to use?
5 days ago by Alex Reynolds 35k
0
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0
replies
7.6k
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Comment: Comment: Intersect multiple BED files
22 days ago by Alex Reynolds 35k
0
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1
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409
views
Comment: Comment: Coverage depth map of genome from multiple sample coverage bedgraphs?
23 days ago by Alex Reynolds 35k
0
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0
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306
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Answer: Answer: Error occurs when migrate-n software performs "make mpis"
24 days ago by Alex Reynolds 35k
0
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1
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409
views
Comment: Comment: Coverage depth map of genome from multiple sample coverage bedgraphs?
24 days ago by Alex Reynolds 35k
1
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1
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409
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Answer: Answer: Coverage depth map of genome from multiple sample coverage bedgraphs?
24 days ago by Alex Reynolds 35k
0
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0
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680
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Answer: Answer: Convert Gene symbol to Ensembl ID
5 weeks ago by Alex Reynolds 35k
1
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0
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464
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Comment: Comment: Genes with multiple chromosome locations
6 weeks ago by Alex Reynolds 35k
0
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1
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680
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Comment: Comment: Convert Gene symbol to Ensembl ID
6 weeks ago by Alex Reynolds 35k
0
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1
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680
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Comment: Comment: Convert Gene symbol to Ensembl ID
6 weeks ago by Alex Reynolds 35k
0
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0
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18k
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Comment: Comment: BEDOPS gtf2bed conversion error with Ensembl GTF
7 weeks ago by Alex Reynolds 35k
0
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0
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428
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Comment: Comment: line 164: 15342 Segmentation fault (core dumped) ${cmd} ${options} - 0<&0
8 weeks ago by Alex Reynolds 35k
2
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0
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428
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Answer: Answer: line 164: 15342 Segmentation fault (core dumped) ${cmd} ${options} - 0<&0
8 weeks ago by Alex Reynolds 35k
0
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0
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631
views
Comment: Comment: Random Access remote BAM files
8 weeks ago by Alex Reynolds 35k
0
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1
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631
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Comment: Comment: Random Access remote BAM files
8 weeks ago by Alex Reynolds 35k
0
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1
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631
views
Comment: Comment: Random Access remote BAM files
8 weeks ago by Alex Reynolds 35k
0
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1
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631
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Answer: Answer: Random Access remote BAM files
8 weeks ago by Alex Reynolds 35k
2
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1
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418
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Answer: Answer: Double counts with bedtools intersect?
3 months ago by Alex Reynolds 35k
0
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0
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1.2k
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Comment: Comment: Some lines are not well organized in BED file, how to correct them ? Thanks a lo
3 months ago by Alex Reynolds 35k
0
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1
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1.2k
views
Comment: Comment: Some lines are not well organized in BED file, how to correct them ? Thanks a lo
3 months ago by Alex Reynolds 35k
1
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1
reply
1.2k
views
Answer: Answer: Some lines are not well organized in BED file, how to correct them ? Thanks a lo
3 months ago by Alex Reynolds 35k
0
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0
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368
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Answer: Answer: identify genes
3 months ago by Alex Reynolds 35k
1
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2
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1.7k
views
Comment: Comment: PanDepth, an ultra-fast and efficient genomic tool for coverage calculation
3 months ago by Alex Reynolds 35k
0
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0
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581
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Comment: Comment: Where can I get a list of SNPs mapping overlapping genes in humans?
4 months ago by Alex Reynolds 35k
0
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0
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581
views
Comment: Comment: Where can I get a list of SNPs mapping overlapping genes in humans?
4 months ago by Alex Reynolds 35k
3
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2
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581
views
Answer: Answer: Where can I get a list of SNPs mapping overlapping genes in humans?
4 months ago by Alex Reynolds 35k
0
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1
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3.2k
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Comment: Comment: Decoding MM and ML tags in .SAM file
5 months ago by Alex Reynolds 35k
1
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0
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741
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Answer: Answer: Filter a BED file based on genome coordinates for gene names
5 months ago by Alex Reynolds 35k
1
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0
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377
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Answer: Answer: distance between chip peaks and individual TSS
5 months ago by Alex Reynolds 35k
0
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0
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582
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Answer: Answer: Simple tools for creation of figures of gene and protein structure
5 months ago by Alex Reynolds 35k
0
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0
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501
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Answer: Answer: Visualize raw rna fastq file and aligned bam file
6 months ago by Alex Reynolds 35k
1
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1
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5.6k
views
Comment: Comment: Macbook M1 pro/M2 pro or Dell (with Ubuntu/other linux distribution) for bioinfo
6 months ago by Alex Reynolds 35k
0
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1
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1.2k
views
Comment: Comment: Getting the overlap between two GTF files
6 months ago by Alex Reynolds 35k
0
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1
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1.2k
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Comment: Comment: Getting the overlap between two GTF files
6 months ago by Alex Reynolds 35k
0
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0
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1.2k
views
Answer: Answer: Getting the overlap between two GTF files
6 months ago by Alex Reynolds 35k
1
vote
1
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639
views
Comment: Comment: Mapping SNP rsIds/ positions to genes coding for proteins
6 months ago by Alex Reynolds 35k
1
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1
reply
639
views
Answer: Answer: Mapping SNP rsIds/ positions to genes coding for proteins
6 months ago by Alex Reynolds 35k
0
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0
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721
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Answer: Answer: BED files
6 months ago by Alex Reynolds 35k
1
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1
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876
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Comment: Comment: Filter human transcription factors
6 months ago by Alex Reynolds 35k
0
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1
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1.4k
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Comment: Comment: Read block operation failed with BAM file
6 months ago by Alex Reynolds 35k
0
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0
replies
438
views
Answer: Answer: Visualize where kmers are on a reference genome
6 months ago by Alex Reynolds 35k
0
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0
replies
1.4k
views
Comment: Comment: Read block operation failed with BAM file
7 months ago by Alex Reynolds 35k
2
votes
8
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1.4k
views
Read block operation failed with BAM file
bgzip samtools bam pysam htslib
updated 6 months ago by 3.0k • written 7 months ago by 35k
2
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0
replies
723
views
Answer: Answer: Create 10,000bp windows for a SNP file and assign each SNP to its respective win
7 months ago by Alex Reynolds 35k
0
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0
replies
1.4k
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Comment: Comment: Read block operation failed with BAM file
7 months ago by Alex Reynolds 35k
0
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0
replies
1.6k
views
Comment: Comment: bedops alternative for bedtools -unionbedg ?
7 months ago by Alex Reynolds 35k
0
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0
replies
1.6k
views
Comment: Comment: bedops alternative for bedtools -unionbedg ?
7 months ago by Alex Reynolds 35k
0
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2
replies
1.6k
views
Comment: Comment: bedops alternative for bedtools -unionbedg ?
7 months ago by Alex Reynolds 35k
0
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1
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1.1k
views
Comment: Comment: Neither pysam nor samtools reading HTTPS-sourced BAM file correctly
7 months ago by Alex Reynolds 35k
2,872 results • Page 1 of 58
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