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Answer: Answer: how to intersect multiple bed files and get results in uncollapsed genomic inter
4 days ago by Alex Reynolds 35k
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139
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LAD/TAD and recombination hotspot data
hotspot recombination lad tad
11 days ago by Alex Reynolds 35k
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0
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188
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Answer: Answer: Decoding MM and ML tags in .SAM file
10 days ago by Alex Reynolds 35k
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4
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426
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Fast BAM header editing
bam
updated 15 days ago by ★ 3.0k • written 16 days ago by 35k
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426
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Comment: Comment: Fast BAM header editing
16 days ago by Alex Reynolds 35k
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667
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Comment: Comment: Finding TF motifs enriched in series of ATAC-seq peaks (using fimo?)
20 days ago by Alex Reynolds 35k
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1
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667
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Comment: Comment: Finding TF motifs enriched in series of ATAC-seq peaks (using fimo?)
22 days ago by Alex Reynolds 35k
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1
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667
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Answer: Answer: Finding TF motifs enriched in series of ATAC-seq peaks (using fimo?)
22 days ago by Alex Reynolds 35k
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325
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Answer: Answer: Does it possible to know what are the adjacent genes up to 1000bp upstream and
10 weeks ago by Alex Reynolds 35k
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1
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964
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Comment: Comment: gtf2bed not converting to bed
10 weeks ago by Alex Reynolds 35k
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1
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964
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Comment: Comment: gtf2bed not converting to bed
11 weeks ago by Alex Reynolds 35k
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2
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964
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Comment: Comment: gtf2bed not converting to bed
11 weeks ago by Alex Reynolds 35k
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0
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964
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Answer: Answer: gtf2bed not converting to bed
11 weeks ago by Alex Reynolds 35k
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0
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346
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Answer: Answer: How do you get functional/biological role of motifs?
4 months ago by Alex Reynolds 35k
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512
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Comment: Comment: Merging and intersecting genomic ranges for an indefinite number of files
5 months ago by Alex Reynolds 35k
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0
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512
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Answer: Answer: Merging and intersecting genomic ranges for an indefinite number of files
5 months ago by Alex Reynolds 35k
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1
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512
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Answer: Answer: Merging and intersecting genomic ranges for an indefinite number of files
5 months ago by Alex Reynolds 35k
2
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1
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505
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Answer: Answer: How can I use nohup command when filtering SNPs?
5 months ago by Alex Reynolds 35k
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0
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688
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Answer: Answer: Bedtools merge but only if intersection exists
6 months ago by Alex Reynolds 35k
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328
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Comment: Comment: trackBrowser: Visualization of sequencing data within a given genome region
7 months ago by Alex Reynolds 35k
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3.0k
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Comment: Comment: Laptops for bioinformatics
7 months ago by Alex Reynolds 35k
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1
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938
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Comment: Comment: How to find overlapping regions in a single bed file
8 months ago by Alex Reynolds 35k
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1
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938
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Answer: Answer: How to find overlapping regions in a single bed file
8 months ago by Alex Reynolds 35k
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395
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Comment: Comment: Unable to install bedops and bedtools on windows 11
9 months ago by Alex Reynolds 35k
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1.1k
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Comment: Comment: Count regions that overlap with python
10 months ago by Alex Reynolds 35k
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0
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1.1k
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Comment: Comment: Count regions that overlap with python
10 months ago by Alex Reynolds 35k
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1
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1.1k
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Answer: Answer: Count regions that overlap with python
10 months ago by Alex Reynolds 35k
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1.1k
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Answer: Answer: Best formats for storing large amounts of data for random access
10 months ago by Alex Reynolds 35k
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310
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Answer: Answer: Visualization of trascription factor family grouped by biological function
10 months ago by Alex Reynolds 35k
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50k
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Comment: Comment: How Can I Know The Length Of Mapped Reads From Bam File?
10 months ago by Alex Reynolds 35k
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0
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1.4k
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Answer: Answer: GFF to BED conversion
11 months ago by Alex Reynolds 35k
2
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1
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755
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Answer: Answer: Mapping chromosome location to gene ID
11 months ago by Alex Reynolds 35k
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569
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Answer: Answer: Comparing bed files for shifts and enlargements
11 months ago by Alex Reynolds 35k
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0
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1.2k
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Comment: Comment: qualimap - bed file error - BED format error, there should be at least 6 fields.
11 months ago by Alex Reynolds 35k
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0
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786
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Answer: Answer: How to create bed file from list of variants with indels and bp values
12 months ago by Alex Reynolds 35k
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1
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951
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Comment: Comment: sliding windows over genome
12 months ago by Alex Reynolds 35k
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0
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968
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Comment: Comment: Can I successfully go from a bed file (narrowpeak) back to a bam file containing
12 months ago by Alex Reynolds 35k
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951
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Answer: Answer: sliding windows over genome
12 months ago by Alex Reynolds 35k
2
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1
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5.5k
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Comment: Comment: Finding Chip Seq Overlaps with Bed files
12 months ago by Alex Reynolds 35k
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539
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Answer: Answer: "moving average" function for "coverage" signal in bed files?
12 months ago by Alex Reynolds 35k
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0
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691
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Answer: Answer: How to interpret similar motifs in Homer results
12 months ago by Alex Reynolds 35k
1
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0
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742
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Comment: Comment: Why the bed file not recognized as a bed file
13 months ago by Alex Reynolds 35k
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0
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742
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Answer: Answer: Why the bed file not recognized as a bed file
13 months ago by Alex Reynolds 35k
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1
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813
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Answer: Answer: Circos plot
13 months ago by Alex Reynolds 35k
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1
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644
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Answer: Answer: SARS-CoV-2 genome on NCBI website
13 months ago by Alex Reynolds 35k
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0
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759
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Answer: Answer: deeptools plotHeatMap - Convert bed files to gene list?
14 months ago by Alex Reynolds 35k
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1
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759
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Comment: Comment: deeptools plotHeatMap - Convert bed files to gene list?
14 months ago by Alex Reynolds 35k
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0
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625
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Comment: Comment: Find genes of interest in large unannotated genome files
14 months ago by Alex Reynolds 35k
4
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4
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1.9k
views
How to iterate over rows of pyranges object
pyranges
updated 14 months ago by ▴ 10 • written 2.2 years ago by 35k
1
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1
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625
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Answer: Answer: Find genes of interest in large unannotated genome files
14 months ago by Alex Reynolds 35k
2,810 results • Page 1 of 57
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