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Comment: Comment: Finding Chip Seq Overlaps with Bed files
23 months ago by Alex Reynolds 35k
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0
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989
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Answer: Answer: "moving average" function for "coverage" signal in bed files?
23 months ago by Alex Reynolds 35k
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0
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1.2k
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Answer: Answer: How to interpret similar motifs in Homer results
23 months ago by Alex Reynolds 35k
1
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0
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1.4k
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Comment: Comment: Why the bed file not recognized as a bed file
2.0 years ago by Alex Reynolds 35k
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0
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1.4k
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Answer: Answer: Why the bed file not recognized as a bed file
2.0 years ago by Alex Reynolds 35k
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1
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1.1k
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Answer: Answer: Circos plot
2.0 years ago by Alex Reynolds 35k
0
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1
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890
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Answer: Answer: SARS-CoV-2 genome on NCBI website
2.0 years ago by Alex Reynolds 35k
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0
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1.4k
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Answer: Answer: deeptools plotHeatMap - Convert bed files to gene list?
2.1 years ago by Alex Reynolds 35k
0
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1
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1.4k
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Comment: Comment: deeptools plotHeatMap - Convert bed files to gene list?
2.1 years ago by Alex Reynolds 35k
0
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0
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865
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Comment: Comment: Find genes of interest in large unannotated genome files
2.1 years ago by Alex Reynolds 35k
4
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4
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2.6k
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How to iterate over rows of pyranges object
pyranges
updated 2.1 years ago by ▴ 10 • written 3.1 years ago by 35k
1
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1
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865
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Answer: Answer: Find genes of interest in large unannotated genome files
2.1 years ago by Alex Reynolds 35k
0
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1
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762
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Answer: Answer: bedtools -u not giving unique files
2.1 years ago by Alex Reynolds 35k
3
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1
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1.8k
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Answer: Answer: How to convert .wib files to .wig or .bed?
2.2 years ago by Alex Reynolds 35k
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0
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786
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Comment: Comment: Determining the transcription factor activators for a particular gene
2.2 years ago by Alex Reynolds 35k
6
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0
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1.5k
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Answer: Answer: Map genomic coordinate to specific chromosome region
2.2 years ago by Alex Reynolds 35k
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0
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1.0k
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Answer: Answer: TET2 Binding Motifs BED file
2.2 years ago by Alex Reynolds 35k
0
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0
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793
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Comment: Comment: Non-zero return code 127 from
2.2 years ago by Alex Reynolds 35k
1
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0
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2.0k
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Answer: Answer: Tips and tricks to improve data visualization in bioinformatics
2.2 years ago by Alex Reynolds 35k
0
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0
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1.7k
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Comment: Comment: Mince a vcf into n bins of a given range
2.3 years ago by Alex Reynolds 35k
0
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1
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1.7k
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Answer: Answer: Mince a vcf into n bins of a given range
2.3 years ago by Alex Reynolds 35k
2
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1
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1.5k
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Answer: Answer: Change the interval of bed file
2.3 years ago by Alex Reynolds 35k
3
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1
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3.9k
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Answer: Answer: How to create specific .bed files for a panel of genes
2.3 years ago by Alex Reynolds 35k
3
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1
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1.4k
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Answer: Answer: Merge two multi-chromosome WIG files
2.3 years ago by Alex Reynolds 35k
1
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1
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2.9k
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Answer: Answer: Getting peak heights from TF chIP-seq data (wig file)
2.3 years ago by Alex Reynolds 35k
1
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0
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3.1k
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Answer: Answer: Random Subset of Individuals from .BED File (.ped not available)
2.3 years ago by Alex Reynolds 35k
0
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0
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840
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Answer: Answer: are there some software to compute depth？
2.3 years ago by Alex Reynolds 35k
1
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1
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1.2k
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Answer: Answer: Annotating genes from the coordinates of variants of a VCF file
2.3 years ago by Alex Reynolds 35k
1
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1
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3.9k
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Comment: Comment: How to search dbSNP using a list of SNPs and retrieve Gene name (hgnc symbol if
2.3 years ago by Alex Reynolds 35k
1
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1
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1.0k
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Comment: Comment: Distinguishing between ambiguously mapped reads in a split bamToBed file
2.3 years ago by Alex Reynolds 35k
1
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1
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1.2k
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Answer: Answer: How to describe an insertion in BED format file?
2.3 years ago by Alex Reynolds 35k
1
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0
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2.1k
views
Comment: Comment: To create a multi fasta file which contains each gene's exons
2.3 years ago by Alex Reynolds 35k
2
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0
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882
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Answer: Answer: From where to get a comprehensive list of genes with gene start, gene end and ch
2.3 years ago by Alex Reynolds 35k
1
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0
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2.1k
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Comment: Comment: To create a multi fasta file which contains each gene's exons
2.3 years ago by Alex Reynolds 35k
1
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1
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2.1k
views
Answer: Answer: To create a multi fasta file which contains each gene's exons
2.3 years ago by Alex Reynolds 35k
1
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0
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1.1k
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Answer: Answer: Plotting a long string of (x,y) values as a chromosome
2.4 years ago by Alex Reynolds 35k
0
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0
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1.2k
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Comment: Comment: Create junctions from Bed file for IGV visualization
2.4 years ago by Alex Reynolds 35k
1
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1
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1.2k
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Answer: Answer: Create junctions from Bed file for IGV visualization
2.4 years ago by Alex Reynolds 35k
1
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1
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2.4k
views
Answer: Answer: How to cut a 15000 sequence file into multiple files of 1000nt each and save it
2.4 years ago by Alex Reynolds 35k
0
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0
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1.2k
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Comment: Comment: Bioinformatics in Graviton2 AWS
2.4 years ago by Alex Reynolds 35k
2
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0
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558
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News: BED format specification
bed bedops
2.4 years ago by Alex Reynolds 35k
0
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0
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1.7k
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Comment: Comment: API for retrieving genes' sequences from genes' symbols in a single call
2.4 years ago by Alex Reynolds 35k
2
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1
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938
views
Answer: Answer: BEDOPS bedmap confusing file for option
2.4 years ago by Alex Reynolds 35k
1
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1
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827
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Answer: Answer: How to find gene annotation given a position in a bacterial genome
2.4 years ago by Alex Reynolds 35k
2
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0
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947
views
Answer: Answer: Fq file to table
2.4 years ago by Alex Reynolds 35k
0
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1
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1.7k
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Answer: Answer: API for retrieving genes' sequences from genes' symbols in a single call
2.4 years ago by Alex Reynolds 35k
0
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1
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1.2k
views
Answer: Answer: Bioinformatics in Graviton2 AWS
2.4 years ago by Alex Reynolds 35k
1
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0
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2.2k
views
Comment: Comment: How to infer the TSS from a gtf file
2.4 years ago by Alex Reynolds 35k
1
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1
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2.2k
views
Answer: Answer: How to infer the TSS from a gtf file
2.4 years ago by Alex Reynolds 35k
2
votes
1
reply
1.4k
views
Answer: Answer: Merging Bed files with depth information
2.4 years ago by Alex Reynolds 35k
2,872 results • Page 3 of 58
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