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2
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2.1k
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Answer: Answer: Trying to run FIMO from Meme suite using command line
23 months ago by Alex Reynolds 35k
3
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0
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762
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Answer: Answer: how to sort the rows of a file as a matrix?
23 months ago by Alex Reynolds 35k
1
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0
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1.0k
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Comment: Comment: How to find out TFBS motifs within 5'-UTR sequences
23 months ago by Alex Reynolds 35k
1
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1
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1.2k
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Comment: Comment: KentUtils Installation Problem
23 months ago by Alex Reynolds 35k
1
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1
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1.2k
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Answer: Answer: KentUtils Installation Problem
23 months ago by Alex Reynolds 35k
1
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1
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1.0k
views
Answer: Answer: How to find out TFBS motifs within 5'-UTR sequences
23 months ago by Alex Reynolds 35k
21
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2
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23k
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Getting list of chromosome names from indexed BAM file
bam samtools
updated 23 months ago by ▴ 60 • written 9.1 years ago by 35k
0
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1
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1.2k
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Comment: Comment: convert Ensemble to HGNC symbols in a file with several columns
23 months ago by Alex Reynolds 35k
0
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1
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1.2k
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Answer: Answer: convert Ensemble to HGNC symbols in a file with several columns
23 months ago by Alex Reynolds 35k
0
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0
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780
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Comment: Comment: Divide the genome to vary lengths windows in R
23 months ago by Alex Reynolds 35k
0
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0
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1.1k
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Answer: Answer: How to search for genes 100Kb up and downstream of any genomic site
23 months ago by Alex Reynolds 35k
0
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0
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1.5k
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Answer: Answer: How to find overlapping coordinates of a gtf file
23 months ago by Alex Reynolds 35k
1
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0
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472
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Comment: Comment: Interpret PCA as combinations of SNPs
23 months ago by Alex Reynolds 35k
2
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0
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748
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Answer: Answer: getting a set of coverage/depth metrics for multiple regions
23 months ago by Alex Reynolds 35k
1
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0
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5.0k
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Comment: Comment: k-mer finding and counting
23 months ago by Alex Reynolds 35k
1
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1
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908
views
Answer: Answer: Getting peak (bed narrowPeak) from signals (Wig)
23 months ago by Alex Reynolds 35k
1
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0
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424
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Answer: Answer: Gradient Descent for gene degradation
23 months ago by Alex Reynolds 35k
1
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1
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544
views
Answer: Answer: Best hit from BLAST for a particular genomic region
23 months ago by Alex Reynolds 35k
0
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0
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885
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Answer: Answer: How to print the header of bed file and the lines that belong to chromosome 2
24 months ago by Alex Reynolds 35k
3
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1
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759
views
Answer: Answer: Bedops split bed coordinates with zero based half opened format
2.0 years ago by Alex Reynolds 35k
0
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0
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1.4k
views
Comment: Comment: Bash operations
2.0 years ago by Alex Reynolds 35k
4
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1
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1.4k
views
Answer: Answer: Bash operations
2.0 years ago by Alex Reynolds 35k
1
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1
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2.9k
views
Comment: Comment: specific k-mer count in multi fasta file
2.0 years ago by Alex Reynolds 35k
1
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1
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695
views
Answer: Answer: NNNNNN in genomic file and promoter sequence
2.0 years ago by Alex Reynolds 35k
0
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0
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756
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Comment: Comment: how to plot one-dimeson heatmap using R
2.0 years ago by Alex Reynolds 35k
1
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0
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1.4k
views
Answer: Answer: How to plot "Distribution of SNPs per Mbp"
2.0 years ago by Alex Reynolds 35k
0
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0
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3.2k
views
Comment: Comment: BED file: Find intervals that overlap a certain percentage and keep the longest
2.0 years ago by Alex Reynolds 35k
2
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1
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3.2k
views
Answer: Answer: BED file: Find intervals that overlap a certain percentage and keep the longest
2.0 years ago by Alex Reynolds 35k
1
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2
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3.2k
views
Comment: Comment: BED file: Find intervals that overlap a certain percentage and keep the longest
2.0 years ago by Alex Reynolds 35k
1
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1
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1.7k
views
Comment: Comment: How do I properly visualize ATAC seq data on UCSC browser
2.0 years ago by Alex Reynolds 35k
3
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1
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1.7k
views
Answer: Answer: How do I properly visualize ATAC seq data on UCSC browser
2.0 years ago by Alex Reynolds 35k
1
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1
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3.2k
views
Comment: Comment: BED file: Find intervals that overlap a certain percentage and keep the longest
2.0 years ago by Alex Reynolds 35k
1
vote
1
reply
3.2k
views
Comment: Comment: BED file: Find intervals that overlap a certain percentage and keep the longest
2.0 years ago by Alex Reynolds 35k
1
vote
1
reply
3.2k
views
Answer: Answer: BED file: Find intervals that overlap a certain percentage and keep the longest
2.0 years ago by Alex Reynolds 35k
1
vote
2
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582
views
Comment: Comment: Trimming gene coding sequence for finding TFBS
2.0 years ago by Alex Reynolds 35k
0
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1
reply
959
views
Comment: Comment: How to compare data in two files and print matching data of file1 and file2
2.0 years ago by Alex Reynolds 35k
0
votes
2
replies
959
views
Answer: Answer: How to compare data in two files and print matching data of file1 and file2
2.0 years ago by Alex Reynolds 35k
0
votes
0
replies
793
views
Comment: Comment: blat standalone version won't run in python cgi
2.1 years ago by Alex Reynolds 35k
0
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1
reply
793
views
Comment: Comment: blat standalone version won't run in python cgi
2.1 years ago by Alex Reynolds 35k
0
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0
replies
636
views
Answer: Answer: How to extract regions from abed file based on variants in vcf file
2.1 years ago by Alex Reynolds 35k
1
vote
1
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982
views
Comment: Comment: Comparing genomes against randomized genomes
2.1 years ago by Alex Reynolds 35k
1
vote
0
replies
657
views
Answer: Answer: Remove all rows that begin with characters and keep only those that begin with n
2.1 years ago by Alex Reynolds 35k
0
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0
replies
4.7k
views
Comment: Comment: Add count numbers to headers in a fasta file
2.1 years ago by Alex Reynolds 35k
1
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0
replies
690
views
Answer: Answer: SNP count in a set of genomic regions
2.1 years ago by Alex Reynolds 35k
0
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0
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2.1k
views
Comment: Comment: How to find tandem duplications pattern in a DNA sequence
2.1 years ago by Alex Reynolds 35k
1
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0
replies
4.6k
views
Answer: Answer: How to count elements with a specific condition in csv file using python
2.1 years ago by Alex Reynolds 35k
2
votes
2
replies
1.2k
views
Answer: Answer: Mapping RNA seq reads from bed file to genes
2.1 years ago by Alex Reynolds 35k
1
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1
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1.7k
views
Comment: Comment: How to choose one TSS for a gene
2.1 years ago by Alex Reynolds 35k
0
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0
replies
1.7k
views
Comment: Comment: How to choose one TSS for a gene
2.1 years ago by Alex Reynolds 35k
3
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1
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2.1k
views
Answer: Answer: How to find tandem duplications pattern in a DNA sequence
2.1 years ago by Alex Reynolds 35k
2,810 results • Page 4 of 57
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