Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Profile
Posts
Awards
Show
all
questions
tools
blogs
news
tutorials
forum
answers
comments
Showing :
all
0
votes
1
reply
155k
views
Comment:
Comment: Extract Reads From A Bam File That Fall Within A Given Region
2.7 years ago by
Alex Reynolds
35k
0
votes
0
replies
1.2k
views
Comment:
Comment: annotate sites with gene info
2.7 years ago by
Alex Reynolds
35k
1
vote
1
reply
18k
views
Comment:
Comment: BEDOPS gtf2bed conversion error with Ensembl GTF
2.7 years ago by
Alex Reynolds
35k
0
votes
1
reply
1.2k
views
Comment:
Comment: annotate sites with gene info
2.7 years ago by
Alex Reynolds
35k
2
votes
1
reply
1.4k
views
Answer:
Answer: Sum up value within a interval
2.7 years ago by
Alex Reynolds
35k
0
votes
1
reply
2.3k
views
Comment:
Comment: Trouble getting BLAT to work
2.7 years ago by
Alex Reynolds
35k
0
votes
0
replies
1.5k
views
Comment:
Comment: Ensure identical output between platforms and operating systems
2.7 years ago by
Alex Reynolds
35k
0
votes
0
replies
1.5k
views
Comment:
Comment: Ensure identical output between platforms and operating systems
2.7 years ago by
Alex Reynolds
35k
0
votes
0
replies
2.9k
views
Comment:
Comment: Trying to run FIMO from Meme suite using command line
2.7 years ago by
Alex Reynolds
35k
0
votes
1
reply
2.9k
views
Comment:
Comment: Trying to run FIMO from Meme suite using command line
2.7 years ago by
Alex Reynolds
35k
2
votes
1
reply
2.9k
views
Answer:
Answer: Trying to run FIMO from Meme suite using command line
2.7 years ago by
Alex Reynolds
35k
3
votes
0
replies
1.0k
views
Answer:
Answer: how to sort the rows of a file as a matrix?
2.7 years ago by
Alex Reynolds
35k
1
vote
0
replies
1.4k
views
Comment:
Comment: How to find out TFBS motifs within 5'-UTR sequences
2.7 years ago by
Alex Reynolds
35k
1
vote
1
reply
1.5k
views
Comment:
Comment: KentUtils Installation Problem
2.7 years ago by
Alex Reynolds
35k
1
vote
1
reply
1.5k
views
Answer:
Answer: KentUtils Installation Problem
2.7 years ago by
Alex Reynolds
35k
1
vote
1
reply
1.4k
views
Answer:
Answer: How to find out TFBS motifs within 5'-UTR sequences
2.7 years ago by
Alex Reynolds
35k
21
votes
2
replies
26k
views
Getting list of chromosome names from indexed BAM file
bam
samtools
updated 2.7 years ago by
aldhairmedico
▴ 70 • written 9.9 years ago by
Alex Reynolds
35k
0
votes
1
reply
1.5k
views
Comment:
Comment: convert Ensemble to HGNC symbols in a file with several columns
2.8 years ago by
Alex Reynolds
35k
0
votes
1
reply
1.5k
views
Answer:
Answer: convert Ensemble to HGNC symbols in a file with several columns
2.8 years ago by
Alex Reynolds
35k
0
votes
0
replies
1.0k
views
Comment:
Comment: Divide the genome to vary lengths windows in R
2.8 years ago by
Alex Reynolds
35k
0
votes
0
replies
1.6k
views
Answer:
Answer: How to search for genes 100Kb up and downstream of any genomic site
2.8 years ago by
Alex Reynolds
35k
0
votes
0
replies
2.3k
views
Answer:
Answer: How to find overlapping coordinates of a gtf file
2.8 years ago by
Alex Reynolds
35k
1
vote
0
replies
624
views
Comment:
Comment: Interpret PCA as combinations of SNPs
2.8 years ago by
Alex Reynolds
35k
2
votes
0
replies
1.2k
views
Answer:
Answer: getting a set of coverage/depth metrics for multiple regions
2.8 years ago by
Alex Reynolds
35k
1
vote
0
replies
5.8k
views
Comment:
Comment: k-mer finding and counting
2.8 years ago by
Alex Reynolds
35k
1
vote
1
reply
1.3k
views
Answer:
Answer: Getting peak (bed narrowPeak) from signals (Wig)
2.8 years ago by
Alex Reynolds
35k
1
vote
0
replies
550
views
Answer:
Answer: Gradient Descent for gene degradation
2.8 years ago by
Alex Reynolds
35k
1
vote
1
reply
711
views
Answer:
Answer: Best hit from BLAST for a particular genomic region
2.8 years ago by
Alex Reynolds
35k
0
votes
0
replies
1.3k
views
Answer:
Answer: How to print the header of bed file and the lines that belong to chromosome 2
2.8 years ago by
Alex Reynolds
35k
3
votes
1
reply
988
views
Answer:
Answer: Bedops split bed coordinates with zero based half opened format
2.8 years ago by
Alex Reynolds
35k
0
votes
0
replies
1.8k
views
Comment:
Comment: Bash operations
2.8 years ago by
Alex Reynolds
35k
4
votes
1
reply
1.8k
views
Answer:
Answer: Bash operations
2.8 years ago by
Alex Reynolds
35k
1
vote
1
reply
3.5k
views
Comment:
Comment: specific k-mer count in multi fasta file
2.8 years ago by
Alex Reynolds
35k
1
vote
1
reply
913
views
Answer:
Answer: NNNNNN in genomic file and promoter sequence
2.8 years ago by
Alex Reynolds
35k
0
votes
0
replies
984
views
Comment:
Comment: how to plot one-dimeson heatmap using R
2.8 years ago by
Alex Reynolds
35k
1
vote
0
replies
1.9k
views
Answer:
Answer: How to plot "Distribution of SNPs per Mbp"
2.8 years ago by
Alex Reynolds
35k
0
votes
0
replies
4.1k
views
Comment:
Comment: BED file: Find intervals that overlap a certain percentage and keep the longest
2.9 years ago by
Alex Reynolds
35k
2
votes
1
reply
4.1k
views
Answer:
Answer: BED file: Find intervals that overlap a certain percentage and keep the longest
2.9 years ago by
Alex Reynolds
35k
1
vote
2
replies
4.1k
views
Comment:
Comment: BED file: Find intervals that overlap a certain percentage and keep the longest
2.9 years ago by
Alex Reynolds
35k
1
vote
1
reply
2.4k
views
Comment:
Comment: How do I properly visualize ATAC seq data on UCSC browser
2.9 years ago by
Alex Reynolds
35k
3
votes
1
reply
2.4k
views
Answer:
Answer: How do I properly visualize ATAC seq data on UCSC browser
2.9 years ago by
Alex Reynolds
35k
1
vote
1
reply
4.1k
views
Comment:
Comment: BED file: Find intervals that overlap a certain percentage and keep the longest
2.9 years ago by
Alex Reynolds
35k
1
vote
1
reply
4.1k
views
Comment:
Comment: BED file: Find intervals that overlap a certain percentage and keep the longest
2.9 years ago by
Alex Reynolds
35k
1
vote
1
reply
4.1k
views
Answer:
Answer: BED file: Find intervals that overlap a certain percentage and keep the longest
2.9 years ago by
Alex Reynolds
35k
1
vote
2
replies
753
views
Comment:
Comment: Trimming gene coding sequence for finding TFBS
2.9 years ago by
Alex Reynolds
35k
0
votes
1
reply
1.2k
views
Comment:
Comment: How to compare data in two files and print matching data of file1 and file2
2.9 years ago by
Alex Reynolds
35k
0
votes
2
replies
1.2k
views
Answer:
Answer: How to compare data in two files and print matching data of file1 and file2
2.9 years ago by
Alex Reynolds
35k
0
votes
0
replies
998
views
Comment:
Comment: blat standalone version won't run in python cgi
2.9 years ago by
Alex Reynolds
35k
0
votes
1
reply
998
views
Comment:
Comment: blat standalone version won't run in python cgi
2.9 years ago by
Alex Reynolds
35k
0
votes
0
replies
823
views
Answer:
Answer: How to extract regions from abed file based on variants in vcf file
2.9 years ago by
Alex Reynolds
35k
2,870 results • Page
5 of 58
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6