Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Profile
Posts
Awards
Show
all
questions
tools
blogs
news
tutorials
forum
answers
comments
Showing :
questions
3
votes
4
replies
1.7k
views
How to merge variants for the same samples from different vcf files?
vcf
2.9 years ago by
steve
★ 3.5k
5
votes
5
replies
5.1k
views
How to convert maf to vcf while retaining original mutation notations?
vcf
maf
updated 9 months ago by
Ram
43k • written 3.0 years ago by
steve
★ 3.5k
7
votes
4
replies
3.9k
views
Visualizing & plotting variant reads within BAM files programmatically?
alignment
3.0 years ago by
steve
★ 3.5k
0
votes
0
replies
772
views
bcftools isec not producing sites.txt
bcftools
3.0 years ago by
steve
★ 3.5k
2
votes
1
reply
5.1k
views
HOMER mergePeaks totals don't add up to peaks input
HOMER
updated 3.3 years ago by
Biostar
20 • written 8.0 years ago by
steve
★ 3.5k
3
votes
9
replies
1.0k
views
How to count the number of alignments in a bam file without using samtools?
bam
updated 3.4 years ago by
xiaoguang
▴ 140 • written 3.4 years ago by
steve
★ 3.5k
0
votes
1
reply
837
views
Small demo bioinformatics workflows which don't require reference data?
workflow
pipeline
updated 10 months ago by
Ram
43k • written 4.6 years ago by
steve
★ 3.5k
0
votes
1
reply
901
views
Safe ways to chunk data to speed up Pindel?
pindel
indel
4.8 years ago by
steve
★ 3.5k
15
votes
7
replies
9.9k
views
Is hierarchical clustering of significant genes 'supervised' or 'unsupervised' clustering?
RNA-Seq
heatmap
clustering
updated 4.9 years ago by
Mozart
▴ 330 • written 7.4 years ago by
steve
★ 3.5k
2
votes
0
replies
1.5k
views
Calculating breadth of coverage for TCGA Whole Exome Sequencing data
tcga
coverage
5.6 years ago by
steve
★ 3.5k
6
votes
10
replies
10k
views
How to submit multithreaded jobs on SLURM and determine number of threads?
slurm
updated 13 months ago by
e.r.zakiev
▴ 200 • written 5.6 years ago by
steve
★ 3.5k
1
vote
2
replies
1.8k
views
IBM Power8/Power9 servers for bioinformatics?
genomics
server
ibm
2.9 years ago by
steve
★ 3.5k
2
votes
4
replies
2.9k
views
Problems left-normalizing variants with bctools, GATK, combining with ANNOVAR annotations
annotation
variant
6.0 years ago by
steve
★ 3.5k
6
votes
4
replies
1.3k
views
How many reads needed to be sure a variant does not exist?
variant calling
updated 6.1 years ago by
Gabriel R.
★ 2.9k • written 6.1 years ago by
steve
★ 3.5k
2
votes
6
replies
2.6k
views
How to make large .tsv/.csv files more accessible for desktop users?
variants
updated 6.2 years ago by
Devon Ryan
104k • written 6.2 years ago by
steve
★ 3.5k
6
votes
4
replies
2.4k
views
Using DRMAA in bioinformatics workflows?
software
updated 11 months ago by
Ram
43k • written 6.4 years ago by
steve
★ 3.5k
1
vote
1
reply
790
views
Converting variant identifiers to genomic coordinates
variant
6.5 years ago by
steve
★ 3.5k
7
votes
10
replies
6.5k
views
6 follow
How to make variant calling run faster?
variant calling
mutect2
gatk
updated 3.0 years ago by
zolotaryovgl
• 0 • written 6.5 years ago by
steve
★ 3.5k
0
votes
5
replies
2.6k
views
Convert amino acid and nucleotide coding changes between notation formats
variant
updated 7.1 years ago by
Petr Ponomarenko
★ 2.8k • written 7.1 years ago by
steve
★ 3.5k
0
votes
2
replies
2.4k
views
Easy way to filter gene list based on chromosome of origin?
RNA-Seq
updated 7.4 years ago by
WouterDeCoster
47k • written 7.4 years ago by
steve
★ 3.5k
5
votes
5
replies
5.5k
views
Easy way to automatically save images of Krona HTML charts?
metagenomics
krona
kraken
updated 7.4 years ago by
Josh Herr
5.8k • written 7.4 years ago by
steve
★ 3.5k
3
votes
2
replies
3.7k
views
HOMER motif discovery gives inconsistent results on repeated runs
homer
motif
updated 7.6 years ago by
ashjay
▴ 40 • written 8.0 years ago by
steve
★ 3.5k
19
votes
8
replies
13k
views
How to tell which transcript is the canonical transcript?
annovar
7.6 years ago by
steve
★ 3.5k
2
votes
2
replies
1.5k
views
Correlating multiple CuffDiff outputs?
RNA-Seq
R
updated 7.7 years ago by
Devon Ryan
104k • written 7.7 years ago by
steve
★ 3.5k
3
votes
1
reply
1.5k
views
Motif not found for protein used for IP?
ChIP-Seq
motif
HITS-CLIP
updated 8.0 years ago by
Mads Lerdrup
▴ 460 • written 8.0 years ago by
steve
★ 3.5k
25 results • Page
1 of 1
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6