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Posts by cartoonist
... Since I could not find any C++ library that meets my requirements, I re-write the kseq library (by @lh3) in C++ using templates, called [`kseq++`](https://github.com/cartoonist/kseqpp). Here, I compared its performance with original kseq and SeqAn: https://github.com/cartoonist/kseqpp SeqAn uses i ...
... If the VCF file is `tabix`-indexed, extracting a subset by region name, let say chromosome `1`, can be done by `bcftools`: bcftools view -r 1 file.vcf.gz ...
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