User: cartoonist

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cartoonist60
Reputation:
60
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New User
Location:
Germany
Last seen:
1 year, 2 months ago
Joined:
4 years, 2 months ago
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a************@gmail.com

Posts by cartoonist

<prev • 2 results • page 1 of 1 • next >
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Answer: A: Which C++ Libraries Are Best For Dealing With Fastq Files?
... Since I could not find any C++ library that meets my requirements, I re-write the kseq library (by @lh3) in C++ using templates, called [`kseq++`](https://github.com/cartoonist/kseqpp). Here, I compared its performance with original kseq and SeqAn: https://github.com/cartoonist/kseqpp SeqAn uses i ...
written 15 months ago by cartoonist60
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Answer: A: How to split vcf file by chromosome?
... If the VCF file is `tabix`-indexed, extracting a subset by region name, let say chromosome `1`, can be done by `bcftools`: bcftools view -r 1 file.vcf.gz ...
written 15 months ago by cartoonist60

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