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4
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9.6k
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Answer: A: How to get the list of common genes from a VennDiagram?
4.3 years ago by manuel.belmadani ★ 1.3k
1
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0
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3.0k
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Answer: A: Annovar using VCF file
updated 4.3 years ago by 43k • written 8.2 years ago by ★ 1.3k
0
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0
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1.1k
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Answer: A: How to write HGVS nomination for noncoding intergenic variants
4.3 years ago by manuel.belmadani ★ 1.3k
0
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1
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1.7k
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Answer: A: Clipping reads within BAM files?
4.5 years ago by manuel.belmadani ★ 1.3k
3
votes
0
replies
7.5k
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Answer: A: Pheatmap row annotation multiple categories
4.5 years ago by manuel.belmadani ★ 1.3k
0
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0
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961
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Answer: A: unsuccessful RnBeads installation
4.7 years ago by manuel.belmadani ★ 1.3k
1
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0
replies
1.4k
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Answer: A: SAM file generation problem
4.7 years ago by manuel.belmadani ★ 1.3k
0
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0
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784
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Answer: A: Genomic screen: Benjamini-Hochberg procedure
4.7 years ago by manuel.belmadani ★ 1.3k
2
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1
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1.1k
views
Answer: A: Find motif in reads and delete everything before / extract everything after
4.7 years ago by manuel.belmadani ★ 1.3k
1
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0
replies
769
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Answer: A: What is best tool for Cohort data of DNA?
4.7 years ago by manuel.belmadani ★ 1.3k
0
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1
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1.4k
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Answer: A: Need suggestions in subsetting the Annovar annotated VCF file
4.7 years ago by manuel.belmadani ★ 1.3k
0
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0
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1.1k
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Answer: A: Motif Analysis searching for NFKB/CEBPB
4.8 years ago by manuel.belmadani ★ 1.3k
0
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0
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1.4k
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Answer: A: How to efficiently get reference bases (hg19) for a list of SNV loci (e.g., from
4.8 years ago by manuel.belmadani ★ 1.3k
6
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0
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905
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Answer: A: VCF File type
4.8 years ago by manuel.belmadani ★ 1.3k
3
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1
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8.0k
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Answer: A: RNA-Seq: Getting Started with Kallisto
4.8 years ago by manuel.belmadani ★ 1.3k
0
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1
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3.9k
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Answer: A: InterVar and Varsome discrepancies in ACMG classification
4.8 years ago by manuel.belmadani ★ 1.3k
1
vote
1
reply
1.4k
views
Answer: C: Novel peptide identification
4.8 years ago by manuel.belmadani ★ 1.3k
1
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2
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1.2k
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Answer: A: All result in one file
updated 4.9 years ago by 11k • written 4.9 years ago by ★ 1.3k
3
votes
0
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4.4k
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Answer: A: How to obtain transcript level TPM using stringtie?
4.9 years ago by manuel.belmadani ★ 1.3k
3
votes
2
replies
14k
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Answer: A: Question: How to run several one-way ANOVAs in R using on different categories?
4.9 years ago by manuel.belmadani ★ 1.3k
1
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1
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3.1k
views
Answer: A: y-axis on Volcano plot
4.9 years ago by manuel.belmadani ★ 1.3k
1
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1
reply
2.8k
views
Answer: A: intersection for several file
4.9 years ago by manuel.belmadani ★ 1.3k
1
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1
reply
2.6k
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Answer: A: Empty BAM file upon mapping with STAR
5.0 years ago by manuel.belmadani ★ 1.3k
3
votes
0
replies
4.8k
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Answer: A: Code golf: detecting homopolymers of length N in the (human) genome
5.0 years ago by manuel.belmadani ★ 1.3k
2
votes
1
reply
1.6k
views
Answer: A: What is the statistics test on proportion data
5.0 years ago by manuel.belmadani ★ 1.3k
1
vote
1
reply
4.6k
views
Answer: A: gnomAD: query utilitites
5.0 years ago by manuel.belmadani ★ 1.3k
1
vote
1
reply
3.5k
views
Answer: A: RPM data analysis with DESeq2
5.0 years ago by manuel.belmadani ★ 1.3k
1
vote
2
replies
2.4k
views
Answer: A: HGVS format to VCF from portal.gdc.cancer.gov
5.0 years ago by manuel.belmadani ★ 1.3k
3
votes
1
reply
1.9k
views
Answer: A: In R or Python, How do I implement an allele sequence "autocomplete" tool given
5.0 years ago by manuel.belmadani ★ 1.3k
0
votes
1
reply
2.0k
views
Answer: A: random sampling genome.fa
5.0 years ago by manuel.belmadani ★ 1.3k
1
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1
reply
1.1k
views
Answer: A: Looking for tool recommendations for text mining
5.1 years ago by manuel.belmadani ★ 1.3k
5
votes
1
reply
5.5k
views
Answer: A: How to combine multiple data files by column names?
5.1 years ago by manuel.belmadani ★ 1.3k
3
votes
1
reply
2.2k
views
Answer: A: Simple FASTQ/A manipulation... how to add a single adapter sequence to 3' of all
5.1 years ago by manuel.belmadani ★ 1.3k
2
votes
0
replies
1.8k
views
Answer: A: How to create a tab delimited file?
5.1 years ago by manuel.belmadani ★ 1.3k
1
vote
2
replies
3.9k
views
Answer: C: Why my Hisat2 result is 0% aligned concordantly and HTseq result is 100% not ali
5.2 years ago by manuel.belmadani ★ 1.3k
1
vote
0
replies
2.6k
views
Answer: A: Where to Download Cancer Raw Reads (fastq)?
5.2 years ago by manuel.belmadani ★ 1.3k
1
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0
replies
1.3k
views
Answer: A: Understanding Bowtie output
5.2 years ago by manuel.belmadani ★ 1.3k
2
votes
1
reply
7.4k
views
Answer: A: Creation of a VCF file from scratch with python
5.2 years ago by manuel.belmadani ★ 1.3k
1
vote
0
replies
2.1k
views
Answer: A: Cannot identify software used to make image
5.2 years ago by manuel.belmadani ★ 1.3k
1
vote
0
replies
4.5k
views
Answer: A: Principal component analysis: PC2 contribute more to variance than PC1?
5.2 years ago by manuel.belmadani ★ 1.3k
1
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0
replies
1.7k
views
Answer: C: BSc Thesis "Machine learning application in diagnosis of a genetic diseases" - I
5.2 years ago by manuel.belmadani ★ 1.3k
0
votes
1
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5.9k
views
Answer: A: How to extract total allele frequency from gnomAD annotation
5.2 years ago by manuel.belmadani ★ 1.3k
1
vote
2
replies
1.4k
views
Answer: A: how to go from aligning forward when analyzing whole exome sequencing
5.2 years ago by manuel.belmadani ★ 1.3k
1
vote
0
replies
2.4k
views
Answer: A: Remove low quality base calls from reads
5.2 years ago by manuel.belmadani ★ 1.3k
1
vote
1
reply
1.5k
views
Answer: A: Seeking for a Linux based script ?
5.2 years ago by manuel.belmadani ★ 1.3k
7
votes
3
replies
11k
views
Answer: A: Reproducing this plot in R
5.2 years ago by manuel.belmadani ★ 1.3k
1
vote
0
replies
7.9k
views
Answer: A: PolyPhen Humdiv vs HumVar discrepancies
5.2 years ago by manuel.belmadani ★ 1.3k
0
votes
0
replies
2.2k
views
Answer: A: same transcript id with STAR quant mode
5.2 years ago by manuel.belmadani ★ 1.3k
3
votes
3
replies
11k
views
Answer: A: STAR or Bowtie for small RNA seq?
5.2 years ago by manuel.belmadani ★ 1.3k
1
vote
1
reply
2.1k
views
Answer: A: Noob question about reading SNP results from BAM file visually
5.2 years ago by manuel.belmadani ★ 1.3k
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