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Showing :
questions
4
votes
6
replies
1.8k
views
'position-aware' aligning of sequences with letter annotations
python
biopython
alignment
pairwise
18 months ago by
Joe
21k
5
votes
4
replies
1.7k
views
Existing Glycomics/Glycan databases with sugar modifications?
glycomics
database
sugars
updated 3.6 years ago by
ellimilial
▴ 20 • written 6.5 years ago by
Joe
21k
3
votes
1
reply
742
views
Overlapping fragments as efficiently as possible
Assembly
python
code-challenge
5.0 years ago by
Joe
21k
0
votes
6
replies
1.6k
views
Calculating pI from structural information rather than sequences
pdb
protein
isoelectric point
updated 5.2 years ago by
Mensur Dlakic
★ 28k • written 5.2 years ago by
Joe
21k
2
votes
2
replies
2.9k
views
adding fields to a genbank (translation)
genbank
updated 2.4 years ago by
Ram
44k • written 8.8 years ago by
Joe
21k
7
votes
7
replies
2.8k
views
Using STDIN with BioPython's PDB methods
biopython
pdb
i/o
stdin
pipes
6.1 years ago by
Joe
21k
1
vote
2
replies
4.1k
views
MAF to Fasta or XMFA - how does it work?
mugsy
maf
fasta
XMFA
updated 6.3 years ago by
steven.davis
▴ 10 • written 7.6 years ago by
Joe
21k
1
vote
1
reply
1.1k
views
Calculating tree diameter
alignment
tree
phylogenetics
graph theory
6.4 years ago by
Joe
21k
0
votes
0
replies
1.1k
views
PDB API for structural similarity searchin
pdb
protein
structure
api
6.5 years ago by
Joe
21k
1
vote
2
replies
1.3k
views
ETE3 compare stop filename truncation
congruency
comparison
phylogenetics
trees
6.6 years ago by
Joe
21k
10
votes
6
replies
3.0k
views
Easiest way to download all Enterobacteria
ncbi
genome
refseq
updated 20 months ago by
Ram
44k • written 6.7 years ago by
Joe
21k
7
votes
5
replies
2.5k
views
Multiple Sequence Alignment quality comparison
alignment
sequence
updated 6.9 years ago by
Joseph Hughes
★ 3.0k • written 6.9 years ago by
Joe
21k
7
votes
3
replies
2.2k
views
Conflicting consensus sequences from different tools (bug in hmmemit?)
hmm
consensus
bipython
python
updated 7.3 years ago by
cryptogenomicon
▴ 160 • written 7.3 years ago by
Joe
21k
2
votes
2
replies
2.0k
views
Entrez.esearch url bug
biopython
updated 7.4 years ago by
Istvan Albert
102k • written 7.4 years ago by
Joe
21k
1
vote
1
reply
2.1k
views
Circular alignment comparisons
circos
updated 7.4 years ago by
biofalconch
★ 1.3k • written 7.5 years ago by
Joe
21k
0
votes
0
replies
1.5k
views
Alignment Score caveats
alignment
7.4 years ago by
Joe
21k
11
votes
3
replies
4.2k
views
MSA scoring tools/scripts
MSA
alignment
python
7.5 years ago by
Joe
21k
2
votes
5
replies
2.8k
views
Merging blast databases
blast
updated 7.5 years ago by
Michael
55k • written 7.5 years ago by
Joe
21k
6
votes
10
replies
8.2k
views
Supress/silence warnings from BioPython
biopython
7.6 years ago by
Joe
21k
9
votes
9
replies
1.8k
views
Retreive associated DOI from PDB
PDB
python
doi
updated 7.6 years ago by
emmahe
▴ 40 • written 7.6 years ago by
Joe
21k
2
votes
5
replies
1.3k
views
[Meta] Why can't we see posts by vote on mobile?
meta
biostars
7.7 years ago by
Joe
21k
0
votes
1
reply
1.0k
views
Consensus sequence and per-position %ID
alignment
updated 7.7 years ago by
Biostar
20 • written 7.8 years ago by
Joe
21k
1
vote
2
replies
2.8k
views
defining consistent plot areas in ggtree
ggtree
R
7.7 years ago by
Joe
21k
0
votes
1
reply
1.5k
views
What up-to-date methods/tools are available for ontology analysis from sequence data?
genome
gene
pangenome
updated 7.7 years ago by
Biostar
20 • written 7.9 years ago by
Joe
21k
0
votes
0
replies
1.7k
views
Bacterial UTR Analysis tools
transcription
UTR
promoter
7.8 years ago by
Joe
21k
3
votes
13
replies
3.2k
views
parsing only 100% identical hits out of BLAST tab
blast
tabular
parsing
updated 7.8 years ago by
Biostar
20 • written 7.8 years ago by
Joe
21k
0
votes
0
replies
1.3k
views
What tools exist for detection of recombinogenic sequences (IS/inverted repeats/transposons etc)
recombination
feature-detection
7.9 years ago by
Joe
21k
3
votes
3
replies
1.9k
views
Comparing unequal trees
phylogenetics
trees
updated 7.9 years ago by
Joseph Hughes
★ 3.0k • written 7.9 years ago by
Joe
21k
1
vote
2
replies
1.3k
views
Essential TeX functions/packages
TeX
LaTeX
Typesetting
updated 7.9 years ago by
John
13k • written 7.9 years ago by
Joe
21k
0
votes
0
replies
2.8k
views
Heatmap re-ordering in plotly
heatmap
visualisation
7.9 years ago by
Joe
21k
5
votes
8
replies
2.9k
views
Creating a 'subsetted' genbank of an operon from a whole genome
genbank
artemis
updated 2.2 years ago by
Ram
44k • written 9.2 years ago by
Joe
21k
1
vote
1
reply
1.9k
views
Script/Application to create a genbank format sub-sequence
genome
7.9 years ago by
Joe
21k
0
votes
3
replies
1.9k
views
Retrieve genbank description from a GI number
blast
entrez
8.2 years ago by
Joe
21k
0
votes
0
replies
1.5k
views
Prunier2.1 execution fail around RAxML system call
phylogenetics
RAxML
8.4 years ago by
Joe
21k
0
votes
2
replies
4.5k
views
Merging gff/gbk to create a 'full' gbk
sequence
annotation
updated 2.3 years ago by
Ram
44k • written 8.9 years ago by
Joe
21k
0
votes
0
replies
1.7k
views
Have Artemis remember the last directory saved to (working directory?)
Artemis
updated 2.2 years ago by
Ram
44k • written 9.2 years ago by
Joe
21k
36 results • Page
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