User: lauraeiv

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lauraeiv0
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Posts by lauraeiv

<prev • 7 results • page 1 of 1 • next >
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How to describe the evolutionary pattern seen in my phylogenetic trees?
... The phylogenetic trees for my genes have the same pattern. They all have two distinct clusters and the clusters consist of the same genomes for all. So it looks like there is a selective pressure which supports my hypothesis. I am trying to come up with the correct wording to describe the tree visu ...
phylogenetics myposts trees written 3.9 years ago by lauraeiv0
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Comment: C: What is in the NCBI chromosome nucleotide database vs nt/refseq_genomic?
... Excellent thank you, very sneaky alright! ...
written 4.0 years ago by lauraeiv0
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What is in the NCBI chromosome nucleotide database vs nt/refseq_genomic?
... What kind of sequences are in the NCBI chromosome database compared to nt or refseq? The definition on the blast page for the chromosome one is unclear to me. Thanks. ...
ncbi blast databases myposts written 4.0 years ago by lauraeiv0 • updated 4.0 years ago by Siva1.6k
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Comment: C: Can you combine nt and WGS nucleotide databases for a BLAST search and make it n
... Thanks for that. I am doing both a nucleotide and protein blast so I am hoping to get the same genomes in the nucleotide as I am with the nr/nt protein database. Is it possible to do with command line? I am very stuck for time so I dont think this is an option for me anyway ...
written 4.0 years ago by lauraeiv0
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Can you combine nt and WGS nucleotide databases for a BLAST search and make it non redundant?
... Hi, I am a beginner in bioinformatics and I want to blast a nucleotide sequence against a nucleotide database but the nucleotide collection(nt) database excludes WGS which i would like to include. Is there a way I can join these two databases to give me the output i want while remaining non redund ...
blast database blast myposts written 4.0 years ago by lauraeiv0 • updated 4.0 years ago by Brian Bushnell16k
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Comment: C: Saving MEGA alignment as an image
... I think you misunderstood my question. I am wondering can you save the actual alignment (i.e output the alignment as image so it can be put in my thesis) not the trees I created. Is this possible to do? but thank you for your answer. ...
written 4.0 years ago by lauraeiv0
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Saving MEGA alignment as an image
... Hi, I am using MEGA to align some sequences and I was wondering is there a way to save the resulting alignment as a PDF or a png image? thanks ...
alignment mega myposts written 4.0 years ago by lauraeiv0 • updated 4.0 years ago by samuelmiver420

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