User: Gabriel Wajnberg

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Posts by Gabriel Wajnberg

<prev • 12 results • page 1 of 2 • next >
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Comment: A: Recovering bam files after unknow deletion in the storage
... Thank you for all the tips! ...
written 11 months ago by Gabriel Wajnberg70
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Comment: C: Recovering bam files after unknow deletion in the storage
... the current readable files I don't trust at all... ...
written 11 months ago by Gabriel Wajnberg70
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Comment: C: Recovering bam files after unknow deletion in the storage
... I just want to check the content of these binary files! or I just categorized as lost ?? ...
written 11 months ago by Gabriel Wajnberg70
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Forum: Recovering bam files after unknow deletion in the storage
... Hello all, We had a problem in our storage and for an unknown reason, we lost data.... I used photorec to recover the lost data, however, photorec recovers (as I understood not the total files), so for example I could recover some bam files and convert them to sam, however they are just a fragment ...
sequencing forum deletion recovering photorec bam written 11 months ago by Gabriel Wajnberg70 • updated 11 months ago by jkbonfield350
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Job: Research Associate- Production Bioinformatics - Atlantic Cancer Research Institute - Moncton -New Brunwsiwck - Canada
... **Institution/Company:** Atlantic Cancer Research Institute http://www.atlanticcancer.ca/en/ **Location:** Moncton, NB **Job Description:** *Position:* Research Associate- Production Bioinformatics *Reports To*: NGS platform manager *Salary:* Commensurate with level of experience *Hours:* 37 ...
bioinformatics cancer job sequencing written 21 months ago by Gabriel Wajnberg70
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Comment: C: GDC server down???
... Thanks!!!!It worked Fine ...
written 23 months ago by Gabriel Wajnberg70
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Comment: C: GDC server down???
... thanks a lot! Let's see what is going on! ...
written 23 months ago by Gabriel Wajnberg70
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GDC server down???
... I am trying to use TCGAbiolinks package to analyze illumina methylation array data, but it is saying to me that the server is down, this is happening since last Friday night. Anyone have some information about it?? ...
tcgabiolinks array methylation gdc written 23 months ago by Gabriel Wajnberg70 • updated 23 months ago by Jade40
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Comment: C: TOPHAT error in mapping left_kept_reads step during a mapping with fusion search
... So I have already used STAR-fusion and it worked... but I wanted to test it with tophat-fusion ...
written 2.4 years ago by Gabriel Wajnberg70
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TOPHAT error in mapping left_kept_reads step during a mapping with fusion search with bowtie1
... I am trying to use tophat with single end fastq for fusion search. I got the bowtie indexes from tophat page and I tried this with also the new tophat version 2.1.1 but here is what is happening: $ ~/bin/tophat-2.1.0.Linux_x86_64/tophat -p 10 -o ./tophat_HCC78 --bowtie1 --fusion-search --keep ...
fusion tophat bowtie written 2.4 years ago by Gabriel Wajnberg70

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Popular Question 19 months ago, created a question with more than 1,000 views. For GDC server down???
Popular Question 8.9 years ago, created a question with more than 1,000 views. For 454 Sequencing With Bwa Mapping

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