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Posts by irhotep
Breakpoint, single-cut-or-join (SCJ), and double-cut-and-join (DCJ) distance of multiple/pairwise alignment
... Greetings. I am working using draft genome assembly of S. aureus (size approx 3.0 mbps), and I would like to determine whether one genome are related each against another by comparing the genome itself, not in the gene/ORF level, thus genome annotation step was omitted from my pipeline. I performed ...
... Greetings, Please forgive us should this question is similar to someone else's: https://www.biostars.org/p/115433/ We were trying to make a genome comparison analysis using progressiveMauve of S. aureus contig in multiFASTA format from several strains (approx. 2.9 mbps each) produced from SPAdes a ...
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