User: eclark28

gravatar for eclark28
eclark280
Reputation:
0
Status:
New User
Last seen:
3 months, 3 weeks ago
Joined:
2 years, 10 months ago
Email:
e*******@fau.edu

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by eclark28

<prev • 6 results • page 1 of 1 • next >
0
votes
0
answers
204
views
0
answers
News: Short Course in Applied Deep Learning
... For any bioinformaticists in Florida, or have interest in learning about deep learning and how to apply it, this may be of interest for you. A group of our colleagues at Florida Atlantic University are putting on an introduction to deep learning short-course this summer. This will include talks on ...
news medicine rna-seq research machine learning written 3 months ago by eclark280
0
votes
0
answers
480
views
0
answers
Database for RNA-Seq, ctDNA, miRNA-Seq
... Is there a good database to look at for RNA-Seq of primary tumors or plasma, ctDNA-Seq, and miRNA-Seq of primary tumor samples. Otherwise is there a database for strictly RNA-Seq of samples obtained from plasma? Looking specifically, for a database that has on the order of greater than 3,000 experim ...
database mirna rna-seq repository written 12 months ago by eclark280
0
votes
0
answers
443
views
0
answers
Cuffdiff Bias towards positive fold changes
... We recently ran some analysis using cuffdiff to perform differential gene expression testing. We have noticed something in our latest testing that is a bit odd. It appears cuffdiff favors genes that have a positive fold change over a negative fold change. We know that this is most likely not the cas ...
differential expression cuffdiff de rna-seq written 16 months ago by eclark280 • updated 15 months ago by Biostar ♦♦ 20
0
votes
2
answers
1.1k
views
2
answers
Comment: C: Help in identifying quality from FASTQC on illumina RNA sequences
... Thanks for the advice. Here are the statistics generated. I am looking mainly to see what categories I should pay closest attention to when looking at the QC report.   https://www.dropbox.com/sh/la8z7freytw2sdm/AAABDazSm-9yR0jCf09l1p4_a?dl=0 ...
written 2.8 years ago by eclark280
0
votes
2
answers
1.1k
views
2
answers
Answer: A: Help in identifying quality from FASTQC on illumina RNA sequences
... https://www.dropbox.com/sh/la8z7freytw2sdm/AAABDazSm-9yR0jCf09l1p4_a?dl=0 ...
written 2.8 years ago by eclark280
0
votes
2
answers
1.1k
views
2
answers
Help in identifying quality from FASTQC on illumina RNA sequences
... I have attached some images below. I am relatively new to using galaxy suite and need some help understanding whether or not the data I have is viable. This data was sequenced previously and I was given it to learn RNA-seq. I ran FASTQC through galaxy on it and here attached are images of 7 of the f ...
illumina quality galaxy rna-seq fastqc written 2.8 years ago by eclark280

Latest awards to eclark28

Popular Question 12 months ago, created a question with more than 1,000 views. For Help in identifying quality from FASTQC on illumina RNA sequences

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1511 users visited in the last hour