User: Ibrahim Tanyalcin

Reputation:
980
Status:
Trusted
Location:
Belgium
Website:
http://i-pv.org/
Last seen:
5 hours ago
Joined:
3 years, 8 months ago
Email:
t****************@gmail.com

I have graduated from Izmir Fen Lisesi (Izmir High School of Science) in 2004. I completed my bachelor in Molecular Biology and Genetics in 2009 fromBogazici University. Following bachelor, I completed my master degree at Vrije Universiteit Brussel (VUB) about Cell and Gene Therapy in 2011. I am currently a PhD student in VUB working on Malformations of Cortical Development. I guess this is as short as it gets:)
I love combining art and science so if you've got some ideas or want to work on a project:
Drop a message at: ibrahim.tanyalcin@i-pv.org
Find me in linkedin: https://be.linkedin.com/in/ibrahimtanyalcin
Find me in researchgate: https://www.researchgate.net/profile/Ibrahim_Tanyalcin

Posts by Ibrahim Tanyalcin

<prev • 118 results • page 1 of 12 • next >
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Comment: C: Multiple Sequence Alignment in the Browser with custom monospace fonts
... ## Published in JOSS, for details: ### [Lexicon-Mono-Seq, DOM Text Based Async MSA Viewer](https://joss.theoj.org/papers/9fbf126b501ad921825f755732450278) ...
written 10 days ago by Ibrahim Tanyalcin980
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Comment: C: How can I get a list of all SNPs from a gene of my interest?
... Hi there, sorry for the delay. I think I had a script that filters duplicates (https://github.com/IbrahimTanyalcin/I-PV/blob/master/ipv/script/invokeCircos.pl), though it is used for visualization. You can do the same with python/perl or whatever you fancy. ...
written 10 weeks ago by Ibrahim Tanyalcin980
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Comment: C: Multiple Sequence Alignment in the Browser with custom monospace fonts
... Added 1 static image. ...
written 3 months ago by Ibrahim Tanyalcin980
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Tool: Multiple Sequence Alignment in the Browser with custom monospace fonts
... This is a small tool I've been working on lately, to visualize multiple sequence alignment without canvas, which makes the text blurry. The tool renders the data asynchronously, so you can have very long sequences (1000 x 100 000) and scroll without significant fps drop. There is 1 static function ...
sequence alignment msa tool written 3 months ago by Ibrahim Tanyalcin980
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Answer: A: Data Visualization Web App
... - If you are from Python background there is Django and Flask. And of course many other alternatives. - If you are used to php etc, there is Lavarel. - Since you are not from javascript background, there is no need to dig deeper into MERN stack (mangoose, express, react node) IMO, if you have a ve ...
written 18 months ago by Ibrahim Tanyalcin980
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Comment: C: MUTAFRAME - a web app for mutation effect prediction & visualization
... Dear Biostars Community, We have our 3rd party API ready and in test phase. If you want your application links to point to a certain mutation in Mutaframe.com, get in contact with me and request an API Key. Thanks! ...
written 19 months ago by Ibrahim Tanyalcin980
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Comment: C: iProtein.info website: Fast online visualization of human genome pathways
... Would string db help? https://string-db.org/ ...
written 19 months ago by Ibrahim Tanyalcin980
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Answer: A: iProtein.info website: Fast online visualization of human genome pathways
... It's great work! Given that you have molecular biology backgrounds apparently has given you a lot of intuition about what might be useful for other researchers. The tool looks clean and nifty. Don't forget that you are developing these tools for a much smaller audience when compared to other areas ...
written 19 months ago by Ibrahim Tanyalcin980
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Answer: A: What computer skills should I put on my resume?
... If you want to pass through the HR manager's list of requirements which he/she rarely understands how much time it takes to master only a single of those items in that list, surely you can write down all the languages and tech stack you have experience with. I would reformulate the question though: ...
written 19 months ago by Ibrahim Tanyalcin980
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Comment: C: Displaying/plotting numerous biological comparisons
... Maybe this can help: [lexicon-rainbow][1]. And here is the [github][2]. [1]: https://www.biostars.org/p/271040/ [2]: https://github.com/IbrahimTanyalcin/lexicon-rainbow ...
written 21 months ago by Ibrahim Tanyalcin980

Latest awards to Ibrahim Tanyalcin

Teacher 3 days ago, created an answer with at least 3 up-votes. For A: How To Create Mutation Diagram In R Or In Any Tools?
Teacher 8 weeks ago, created an answer with at least 3 up-votes. For A: How To Create Mutation Diagram In R Or In Any Tools?
Popular Question 10 weeks ago, created a question with more than 1,000 views. For Blob.js - a small javascript library to draw random blobs/shapes
Appreciated 5 months ago, created a post with more than 5 votes. For lexicon - collection of data visualization components written in Javascript
Teacher 5 months ago, created an answer with at least 3 up-votes. For A: How To Create Mutation Diagram In R Or In Any Tools?
Popular Question 12 months ago, created a question with more than 1,000 views. For Blob.js - a small javascript library to draw random blobs/shapes
Teacher 12 months ago, created an answer with at least 3 up-votes. For A: How To Create Mutation Diagram In R Or In Any Tools?
Appreciated 19 months ago, created a post with more than 5 votes. For I-PV: a CIRCOS module for interactive protein sequence visualization
Centurion 23 months ago, created 100 posts.
Scholar 2.0 years ago, created an answer that has been accepted. For A: Bioinformatics / Computational Biology PhD
Teacher 2.0 years ago, created an answer with at least 3 up-votes. For A: How To Create Mutation Diagram In R Or In Any Tools?
Teacher 2.1 years ago, created an answer with at least 3 up-votes. For A: How To Create Mutation Diagram In R Or In Any Tools?
Popular Question 2.1 years ago, created a question with more than 1,000 views. For Blob.js - a small javascript library to draw random blobs/shapes
Scholar 2.1 years ago, created an answer that has been accepted. For A: Bioinformatics / Computational Biology PhD
Teacher 2.1 years ago, created an answer with at least 3 up-votes. For A: How To Create Mutation Diagram In R Or In Any Tools?
Popular Question 2.1 years ago, created a question with more than 1,000 views. For I-PV: a CIRCOS module for interactive protein sequence visualization
Appreciated 3.2 years ago, created a post with more than 5 votes. For I-PV: a CIRCOS module for interactive protein sequence visualization
Commentator 3.2 years ago, created a comment with at least 3 up-votes. For A: I-PV: a CIRCOS module for interactive protein sequence visualization
Teacher 3.3 years ago, created an answer with at least 3 up-votes. For A: How To Create Mutation Diagram In R Or In Any Tools?
Scholar 3.4 years ago, created an answer that has been accepted. For A: I-PV: a CIRCOS module for interactive protein sequence visualization
Teacher 3.4 years ago, created an answer with at least 3 up-votes. For A: How To Create Mutation Diagram In R Or In Any Tools?
Scholar 3.4 years ago, created an answer that has been accepted. For A: I-PV: a CIRCOS module for interactive protein sequence visualization
Teacher 3.4 years ago, created an answer with at least 3 up-votes. For A: How To Create Mutation Diagram In R Or In Any Tools?
Teacher 3.5 years ago, created an answer with at least 3 up-votes. For A: How To Create Mutation Diagram In R Or In Any Tools?
Scholar 3.7 years ago, created an answer that has been accepted. For A: I-PV: a CIRCOS module for interactive protein sequence visualization

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