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Comment: Comment: Can any JBrowse2 tracks show multiple colors for reads at different nucleotide p
23 days ago by I0110 ▴ 140
0
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1
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559
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Comment: Comment: Can any JBrowse2 tracks show multiple colors for reads at different nucleotide p
26 days ago by I0110 ▴ 140
4
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7
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559
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Can any JBrowse2 tracks show multiple colors for reads at different nucleotide positions?
JBrowse JBrowse2
updated 23 days ago by ★ 3.8k • written 27 days ago by ▴ 140
0
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0
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212
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Tutorial: Parsing HMMER output
HMMER
updated 4 weeks ago by 141k • written 4 weeks ago by ▴ 140
0
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1
reply
610
views
Comment: Comment: Identifying syntenic gene pairs
8 months ago by I0110 ▴ 140
0
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3
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610
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Identifying syntenic gene pairs
Synteny
updated 8 months ago by ★ 1.9k • written 9 months ago by ▴ 140
0
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1
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459
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Pre-filtering of annotated isoforms based on splice junctions
RSEM isoforms splicing RNA-seq Kallisto
updated 10 months ago by ★ 1.9k • written 10 months ago by ▴ 140
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0
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858
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Comment: Comment: JBrowse on GitHub (A question about file size)
15 months ago by I0110 ▴ 140
3
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4
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858
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JBrowse on GitHub (A question about file size)
JBrowse GitHub
15 months ago by I0110 ▴ 140
0
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0
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626
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Comment: Comment: A question about STAR and SLURM
22 months ago by I0110 ▴ 140
3
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2
replies
626
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A question about STAR and SLURM
SLURM STAR
22 months ago by I0110 ▴ 140
12
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3
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761
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A question about code sharing for publication
code
updated 16 months ago by 43k • written 23 months ago by ▴ 140
0
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1
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20k
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Comment: Comment: Filtration Of Reads With Length Lower Than 30 From Bam
23 months ago by I0110 ▴ 140
0
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0
replies
479
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Understanding degradome-seq result
degradome
2.6 years ago by I0110 ▴ 140
0
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2
replies
23k
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Comment: C: Gene Set Enrichment Analysis
3.3 years ago by I0110 ▴ 140
0
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1
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23k
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Comment: A: Gene Set Enrichment Analysis
3.3 years ago by I0110 ▴ 140
2
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4
replies
1.5k
views
What is "Possible polymerase run-on fragment"?
transcriptome
updated 3.6 years ago by 43k • written 5.9 years ago by ▴ 140
2
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1
reply
3.6k
views
Thermo Xcalibur RAW data to MGF
mass spectrometry massspectrometry
updated 4.2 years ago by 20 • written 5.9 years ago by ▴ 140
6
votes
13
replies
5.0k
views
How to add the start and stop position information to a gff file?
genome R Assembly Python
updated 4.6 years ago by 8.5k • written 7.2 years ago by ▴ 140
0
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1
reply
2.5k
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Comment: C: Nanopore data to gtf/gff file
4.8 years ago by I0110 ▴ 140
0
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0
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2.5k
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Comment: C: Nanopore data to gtf/gff file
4.8 years ago by I0110 ▴ 140
1
vote
6
replies
2.5k
views
Nanopore data to gtf/gff file
sequencing assembly
updated 3.0 years ago by • 0 • written 4.9 years ago by ▴ 140
0
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1
reply
2.5k
views
Comment: C: Nanopore data to gtf/gff file
4.9 years ago by I0110 ▴ 140
7
votes
2
replies
1.4k
views
How to start a website with jbrowse to show sequencing data?
jbrowse
updated 5.5 years ago by 20 • written 5.6 years ago by ▴ 140
0
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1
reply
2.3k
views
How to merge mgf files?
Proteomics
updated 5.7 years ago by ▴ 180 • written 5.7 years ago by ▴ 140
0
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0
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1.5k
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Comment: C: What is "Possible polymerase run-on fragment"?
5.9 years ago by I0110 ▴ 140
0
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0
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3.1k
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Comment: C: transition to bioinformatics
5.9 years ago by I0110 ▴ 140
0
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1
reply
1.5k
views
Comment: C: What is "Possible polymerase run-on fragment"?
5.9 years ago by I0110 ▴ 140
0
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0
replies
1.7k
views
Comment: C: Possible polymerase run-on fragment (within 2Kbases of a reference transcript)
5.9 years ago by I0110 ▴ 140
1
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0
replies
2.1k
views
Comment: C: CDS prediction for newly assembled transcripts
5.9 years ago by I0110 ▴ 140
2
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2
replies
2.1k
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CDS prediction for newly assembled transcripts
RNA-Seq transcriptome Assembly CDS
5.9 years ago by I0110 ▴ 140
0
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1
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2.2k
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Comment: C: How to fix 5'UTR annotation with RNA-seq data?
6.2 years ago by I0110 ▴ 140
1
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3
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2.2k
views
How to fix 5'UTR annotation with RNA-seq data?
RNA-Seq
updated 6.2 years ago by ▴ 40 • written 6.2 years ago by ▴ 140
2
votes
1
reply
2.3k
views
Identify transcription start site using RNA-seq data
RNA-Seq
updated 6.2 years ago by ▴ 50 • written 6.2 years ago by ▴ 140
0
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0
replies
1.1k
views
Comment: C: The use of "and" in bioinformatics literature
6.3 years ago by I0110 ▴ 140
1
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2
replies
1.1k
views
The use of "and" in bioinformatics literature
Microarray
updated 6.3 years ago by ★ 1.9k • written 6.3 years ago by ▴ 140
7
votes
4
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2.4k
views
In the gff3 format, could one eukaryotic mRNA contain more than one protein coding sequences (i.e. polycistronic)?
gff3 annotation
6.3 years ago by I0110 ▴ 140
0
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0
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2.4k
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Comment: C: In gff3 format, could one eukaryotic mRNA contain more than one protein coding s
6.3 years ago by I0110 ▴ 140
0
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1
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2.4k
views
Comment: C: In gff3 format, could one eukaryotic mRNA contain more than one protein coding s
6.3 years ago by I0110 ▴ 140
0
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0
replies
986
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bed file to gtf/gff
genome annotation
6.6 years ago by I0110 ▴ 140
0
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1
reply
1.8k
views
Comment: C: Host bam file on MongoDB?
6.7 years ago by I0110 ▴ 140
0
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1
reply
1.8k
views
Comment: C: Host bam file on MongoDB?
6.7 years ago by I0110 ▴ 140
0
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1
reply
1.8k
views
Comment: C: Host bam file on MongoDB?
6.7 years ago by I0110 ▴ 140
1
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7
replies
1.8k
views
Host bam file on MongoDB?
MongoDB R
6.7 years ago by I0110 ▴ 140
0
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0
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2.5k
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Comment: C: Homologs between tomato and Arabidopsis
6.8 years ago by I0110 ▴ 140
0
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1
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2.5k
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Comment: C: Homologs between tomato and Arabidopsis
6.8 years ago by I0110 ▴ 140
6
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5
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2.5k
views
Homologs between tomato and Arabidopsis
genome homology
updated 6.8 years ago by 35k • written 6.8 years ago by ▴ 140
0
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0
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4.2k
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Comment: C: Differential expression for two very different samples
6.8 years ago by I0110 ▴ 140
0
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0
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4.2k
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Comment: C: Differential expression for two very different samples
6.8 years ago by I0110 ▴ 140
11
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13
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4.2k
views
6 follow
Differential expression for two very different samples
RNA-Seq Statistics
updated 6.8 years ago by ★ 3.4k • written 6.8 years ago by ▴ 140
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