User: hafiz.talhamalik
hafiz.talhamalik • 230
- Reputation:
- 230
- Status:
- Trusted
- Location:
- Pakistan
- Twitter:
- @hafizmuhdtalha
- Last seen:
- 1 week, 2 days ago
- Joined:
- 4 years, 6 months ago
- Email:
- h***************@gmail.com
Posts by hafiz.talhamalik
<prev
• 115 results •
page 1 of 12 •
next >
0
votes
0
answers
115
views
0
answers
... for blast I used 10cpus. ...
written 10 weeks ago by
hafiz.talhamalik • 230
0
votes
0
answers
115
views
0
answers
... I am using maker tool for annotation of a plant genome (non-model specie). I generated the de-novo assembly and now I doing it's annotation. It's been 3 days now and annotation is not completed yet.
fasta file size was around 450MB. as per my thinking it shouldn't be taking that long.
Anyone has the ...
written 10 weeks ago by
hafiz.talhamalik • 230
0
votes
1
answer
120
views
1
answers
... i came across few tools like maker-p but most of the genomes they used were already annotated. ...
written 12 weeks ago by
hafiz.talhamalik • 230
3
votes
1
answer
120
views
1
answer
... any suggestion of tool for annotation of plant genome ? data I have is of plant for which no prior genome/annotation is available. I did the denovo assembly and now I want to perform annotation. suggestion would be appreciated ...
written 12 weeks ago by
hafiz.talhamalik • 230
• updated
12 weeks ago by
colindaven • 2.2k
0
votes
0
answers
83
views
0
answers
... try quantTB tool, its basically for TB strains
but you can build your own database as well ...
written 12 weeks ago by
hafiz.talhamalik • 230
0
votes
0
answers
329
views
0
answers
... enable the tag -fastqmin 0 -fastqmax 47 while filtering. It will resolve the issue ...
written 12 weeks ago by
hafiz.talhamalik • 230
2
votes
0
answers
99
views
0
answers
... I want to perform lineage analysis on my microbial samples. I came across one platform TGS-TB which do this for tuberculosis, but it has the limitation of data uploading.
I want to know is there any tool, package which help me perform this type of analysis for my samples ?? ...
written 3 months ago by
hafiz.talhamalik • 230
0
votes
1
answer
435
views
1
answers
Comment:
C: Metagenomics data analysis
... you can also proceed without mapping file as well ...
written 4 months ago by
hafiz.talhamalik • 230
0
votes
1
answer
435
views
1
answers
Comment:
C: Metagenomics data analysis
... you can also proceed without mapping file as well ...
written 4 months ago by
hafiz.talhamalik • 230
1
vote
0
answers
170
views
0
answers
... what's in ur expt variable ?? how many replicates ?? ...
written 4 months ago by
hafiz.talhamalik • 230
Latest awards to hafiz.talhamalik
Popular Question
10 weeks ago,
created a question with more than 1,000 views.
For Threshold of removing genes with low counts ?
Popular Question
6 months ago,
created a question with more than 1,000 views.
For Quantum Computing in Genomics
Supporter
6 months ago,
voted at least 25 times.
Centurion
6 months ago,
created 100 posts.
Student
9 months ago,
asked a question with at least 3 up-votes.
For Threshold of removing genes with low counts ?
Popular Question
12 months ago,
created a question with more than 1,000 views.
For Threshold of removing genes with low counts ?
Popular Question
24 months ago,
created a question with more than 1,000 views.
For Threshold of removing genes with low counts ?
Popular Question
24 months ago,
created a question with more than 1,000 views.
For Which package to use for RPKM/FPKM RNA-seq counts?
Use of this site constitutes acceptance of our User
Agreement
and Privacy
Policy.
Powered by Biostar
version 2.3.0
Traffic: 1419 users visited in the last hour