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Comment: Comment: Custom Matrices With Ncbi Blast
5 months ago by H.Hasani ▴ 990
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Using BLASTp with Custom Substitution Matrices
BLASTp
updated 5 months ago by ★ 1.3k • written 5 months ago by ▴ 990
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Comment: Comment: How to use Anaconda/Miniconda more effectively ?
6 months ago by H.Hasani ▴ 990
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1.0k
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Comment: Comment: How to use Anaconda/Miniconda more effectively ?
6 months ago by H.Hasani ▴ 990
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1
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2.0k
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Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
11 months ago by H.Hasani ▴ 990
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Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
11 months ago by H.Hasani ▴ 990
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397
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Amplicon analysis from nanopore sequencing
ASV ONT amplicon
11 months ago by H.Hasani ▴ 990
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1.6k
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Comment: Comment: biomaRT doesn't report uniprot id
15 months ago by H.Hasani ▴ 990
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1.6k
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biomaRt doesn't report uniprot id
R Uniprot biomaRt
15 months ago by H.Hasani ▴ 990
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1.6k
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Comment: Comment: biomaRT doesn't report uniprot id
15 months ago by H.Hasani ▴ 990
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2
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1.5k
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Comment: Comment: NCBI's IgBLAST version 1.21.0 is now available
20 months ago by H.Hasani ▴ 990
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1.0k
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Comment: Comment: take user options before calling snakemake
21 months ago by H.Hasani ▴ 990
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3
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1.0k
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take user options before calling snakemake
args snakemake sequencing python analysis
21 months ago by H.Hasani ▴ 990
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920
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Comment: Comment: Downloading the IMGT/V-QUEST software
24 months ago by H.Hasani ▴ 990
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13k
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Comment: Comment: Command Line Tool To Obtain Complementary And/Or Inverse Strand From Fasta Files
3.0 years ago by H.Hasani ▴ 990
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1
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11k
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Comment: Comment: Finding Orf And Corresponding Strand In A Dna Sequence
3.0 years ago by H.Hasani ▴ 990
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4.0k
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Answer: Answer: Assembly of oxford nanopore sequencing data
3.0 years ago by H.Hasani ▴ 990
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1.3k
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Comment: Comment: samtools mpileup quality filtering for long read ONT data
3.1 years ago by H.Hasani ▴ 990
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2.7k
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Comment: Comment: ONT analysis on Ubuntu
3.1 years ago by H.Hasani ▴ 990
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689
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Writing into logs in multiple shell commands in snakemake produces error
snakemake samtools
3.1 years ago by H.Hasani ▴ 990
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1
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576
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Analyzing nanoprobes data
Nanoprobes
updated 3.2 years ago by 148k • written 3.2 years ago by ▴ 990
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868
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Comment: C: Statistic test for percentiles values
4.0 years ago by H.Hasani ▴ 990
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2.1k
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Answer: A: How I produce such a plot in R
4.4 years ago by H.Hasani ▴ 990
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4.4k
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Answer: A: Statistical test for overlap
4.6 years ago by H.Hasani ▴ 990
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2.0k
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Comment: C: TCGAbiolinks problem downloading ASCAT2 data
4.6 years ago by H.Hasani ▴ 990
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1.1k
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Answer: C: Survival analysis, K-M vs actuarial
4.6 years ago by H.Hasani ▴ 990
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1.9k
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Comment: C: Calculate correlations between ChipSeq data sets
4.9 years ago by H.Hasani ▴ 990
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1.8k
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Comment: C: How to make a figure of gene mutation distribution like this using R language?
4.9 years ago by H.Hasani ▴ 990
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1
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1.7k
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Answer: C: R: pedigree analysis
4.9 years ago by H.Hasani ▴ 990
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3.9k
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Comment: C: MultiQC not generating ouput ?
4.9 years ago by H.Hasani ▴ 990
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1.3k
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Answer: A: Create a heatmap
4.9 years ago by H.Hasani ▴ 990
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3.3k
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Answer: A: How extract gene TPM from GTEx?
5.0 years ago by H.Hasani ▴ 990
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1
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24k
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Comment: C: ggplot second y-axis: how to specify a secondary axis if I don't want to scale m
5.1 years ago by H.Hasani ▴ 990
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1
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24k
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Comment: C: ggplot second y-axis: how to specify a secondary axis if I don't want to scale m
5.1 years ago by H.Hasani ▴ 990
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1
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918
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TCGA mutations on Cbioportal
snp
5.1 years ago by H.Hasani ▴ 990
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7.4k
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Comment: C: SNPs located in promoter region. OR exon, intron, 5'UTR, 3'UTR
updated 5.1 years ago by 44k • written 9.1 years ago by ▴ 990
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Answer: A: SNPs located in promoter region. OR exon, intron, 5'UTR, 3'UTR
updated 5.1 years ago by 44k • written 9.1 years ago by ▴ 990
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3.2k
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Answer: A: How many SNPs are sufficiant for covering?
updated 5.1 years ago by 44k • written 9.1 years ago by ▴ 990
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4.3k
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Answer: A: No significantly mutated genes in Mutsig
updated 5.1 years ago by 44k • written 9.2 years ago by ▴ 990
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1.5k
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Comment: C: grep with -f switch is not working
5.1 years ago by H.Hasani ▴ 990
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3.0k
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Comment: C: Removing a chromosome from a fasta file
5.1 years ago by H.Hasani ▴ 990
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965
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Comment: C: how can i find all of genes involve in special disease?
5.1 years ago by H.Hasani ▴ 990
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17k
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Comment: C: Annotate Affymetrix probesets to Gene symbols
5.2 years ago by H.Hasani ▴ 990
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1
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17k
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Comment: C: Annotate Affymetrix probesets to Gene symbols
5.2 years ago by H.Hasani ▴ 990
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1
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17k
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Comment: C: Annotate Affymetrix probesets to Gene symbols
5.2 years ago by H.Hasani ▴ 990
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1
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9.4k
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Comment: C: snakemake: pipeline failed with MissingOutputException
5.2 years ago by H.Hasani ▴ 990
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9.4k
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Comment: C: snakemake: pipeline failed when submit to cluster
5.2 years ago by H.Hasani ▴ 990
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1
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17k
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Comment: C: Annotate Affymetrix probesets to Gene symbols
5.2 years ago by H.Hasani ▴ 990
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1
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17k
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Comment: C: Annotate Affymetrix probesets to Gene symbols
5.2 years ago by H.Hasani ▴ 990
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813
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Answer: A: ucsc genome browser variants read
5.3 years ago by H.Hasani ▴ 990
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