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Comment: C: plotting problem with loop in R
4.8 years ago by H.Hasani ▴ 990
1
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1
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4.3k
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Comment: C: plotting problem with loop in R
4.8 years ago by H.Hasani ▴ 990
1
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1
reply
4.3k
views
Comment: C: plotting problem with loop in R
4.8 years ago by H.Hasani ▴ 990
0
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1
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1.2k
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Answer: A: Barplot with base point as 0.5
4.8 years ago by H.Hasani ▴ 990
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1
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4.3k
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Comment: C: plotting problem with loop in R
4.8 years ago by H.Hasani ▴ 990
1
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1
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2.4k
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Comment: C: Recovering bam files after unknow deletion in the storage
4.9 years ago by H.Hasani ▴ 990
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0
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932
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Answer: A: Mutated gene based pathway enrichment
4.9 years ago by H.Hasani ▴ 990
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0
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14k
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Comment: C: How to run several one-way ANOVAs in R using on different categories?
4.9 years ago by H.Hasani ▴ 990
3
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0
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1.8k
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Answer: A: Getting this specific information from gene- annotation enrichment analysis
4.9 years ago by H.Hasani ▴ 990
3
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0
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2.3k
views
Answer: A: venndiagram `Error in draw.quintuple.venn`?
5.1 years ago by H.Hasani ▴ 990
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0
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4.7k
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Comment: C: Create snakefile based on R script
5.3 years ago by H.Hasani ▴ 990
2
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0
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2.9k
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Answer: A: Lolliplot graph for mutations
5.4 years ago by H.Hasani ▴ 990
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0
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7.6k
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Answer: A: download tumor and normal data from TCGA
5.4 years ago by H.Hasani ▴ 990
0
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0
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696
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How to get AF in TCGA MutSigNozzleReport2CV Level_4
SNP tcga alele fraction
5.4 years ago by H.Hasani ▴ 990
2
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1
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2.5k
views
Answer: A: Bioinformatics terms that might be confusing for beginners
5.6 years ago by H.Hasani ▴ 990
0
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0
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5.1k
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Comment: C: Interpretation of TCGA CNV data
5.7 years ago by H.Hasani ▴ 990
1
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0
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4.8k
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Comment: C: The outputs of GISTIC
5.7 years ago by H.Hasani ▴ 990
0
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0
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4.5k
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Comment: C: error for barplot in enrichGO(clusterProfiler)
5.8 years ago by H.Hasani ▴ 990
0
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1
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8.9k
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Comment: C: Genotyping, genotype calling or SNP calling?
5.8 years ago by H.Hasani ▴ 990
2
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2
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3.8k
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TCGA raw data (Level 1)
RNA-Seq SNP copy number
5.8 years ago by H.Hasani ▴ 990
3
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5
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10k
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Bowtie2 error with single end mapping
ChIP-Seq single-end read mapping
updated 5.9 years ago by ▴ 50 • written 7.1 years ago by ▴ 990
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0
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2.0k
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Comment: C: Detection of SNPs
5.9 years ago by H.Hasani ▴ 990
0
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1
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2.0k
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Answer: A: Detection of SNPs
5.9 years ago by H.Hasani ▴ 990
0
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0
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6.9k
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Comment: C: use firehose_get to download TCGA data
5.9 years ago by H.Hasani ▴ 990
0
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1
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6.9k
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Comment: C: use firehose_get to download TCGA data
5.9 years ago by H.Hasani ▴ 990
0
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0
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1.7k
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Comment: C: COSMIC paired normal cell lines for somatic mutation calling
6.4 years ago by H.Hasani ▴ 990
0
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0
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33k
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Answer: A: In simple words - what is k-mer??
6.4 years ago by H.Hasani ▴ 990
2
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3
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3.0k
views
How to Specify Genome Build in MutSigCV Input ?
gene Assembly SNP genome
updated 20 months ago by 43k • written 8.4 years ago by ▴ 990
0
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1
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1.9k
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Comment: C: Recognizing an organism which is combination of other organisms
6.8 years ago by H.Hasani ▴ 990
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0
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6.1k
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Comment: C: samtools view region
6.8 years ago by H.Hasani ▴ 990
1
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0
replies
1.5k
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Answer: A: functional variant discovery after GATK variant calling
6.8 years ago by H.Hasani ▴ 990
0
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1
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6.1k
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Comment: C: samtools view region
6.8 years ago by H.Hasani ▴ 990
0
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1
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2.5k
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Comment: C: TCGA raw counts DexSeq
6.8 years ago by H.Hasani ▴ 990
0
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1
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6.1k
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Comment: C: samtools view region
6.8 years ago by H.Hasani ▴ 990
0
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0
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1.6k
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Answer: A: Broad rules of thumb on # of variations
6.8 years ago by H.Hasani ▴ 990
1
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1
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6.1k
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Answer: A: samtools view region
6.8 years ago by H.Hasani ▴ 990
1
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1
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2.5k
views
Answer: A: TCGA raw counts DexSeq
6.8 years ago by H.Hasani ▴ 990
0
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0
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9.9k
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Comment: C: GEO datasets: Raw data is available on Series record
6.8 years ago by H.Hasani ▴ 990
0
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1
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9.9k
views
Comment: C: GEO datasets: Raw data is available on Series record
6.8 years ago by H.Hasani ▴ 990
0
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2
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3.5k
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Comment: C: Interpreting unusual-looking mean-variance plot from EdgeR
6.9 years ago by H.Hasani ▴ 990
0
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0
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4.1k
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Comment: C: clusterProfiler (KEGG Enrichment Analysis) error
6.9 years ago by H.Hasani ▴ 990
0
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0
replies
10k
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Comment: C: Bowtie2 error with single end mapping
7.1 years ago by H.Hasani ▴ 990
3
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1
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1.6k
views
Comment: C: How to predict mutation without using variant callers like GATK, Mutect?
7.1 years ago by H.Hasani ▴ 990
0
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0
replies
1.1k
views
Comment: C: variant filtration criteria
7.1 years ago by H.Hasani ▴ 990
1
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1
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26k
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Comment: C: Duplicated Reads In Rna-Seq Experiment
7.1 years ago by H.Hasani ▴ 990
1
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0
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1.7k
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Comment: C: SNP Data Quality control
7.1 years ago by H.Hasani ▴ 990
0
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1
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1.6k
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Benchmark papers for Chip genomic enrichment
ChIP-Seq gene significant tags
updated 7.1 years ago by 12k • written 7.1 years ago by ▴ 990
0
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0
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4.8k
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Comment: C: Chip-Seq Enrichment Profile Significance?
7.1 years ago by H.Hasani ▴ 990
8
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11
replies
2.7k
views
Visualizing mutations burden vs. gene expression
SNP gene R rna-seq
updated 7.4 years ago by 20 • written 7.8 years ago by ▴ 990
0
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1
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1.6k
views
Comment: C: chi squared test for comparing two groups of proteins
7.5 years ago by H.Hasani ▴ 990
194 results • Page 2 of 4
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