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- USA/Newark/New Jersey Institute of Technology
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Posts by syrttgump
... Hi All. I am using StringTie to assemble transcriptome from my RNA-Seq data. The question is that if I use refSeq as reference annotation which was download from UCSC genome browser website, does the CDS, start codon and stop codon segments in that gtf file will affect transcriptome assembly? Like w ...
Comment: C: distance between two genes
... This method may not work if genes have many exons, that mean one gene may have many start points and end points. ...
... Hi everyone, I am using the newest version of R and trying to install ggbio, here is my problem: > biocLite("ggbio") BioC_mirror: https://bioconductor.org Using Bioconductor 3.2 (BiocInstaller 1.20.1), R 3.2.3 (2015-12-10). Installing package(s) ‘ggbio’ % Total % Received % Xferd Average ...
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