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Answer: Answer: RnBeads SLURM submission problem.
2.9 years ago by Ido Tamir 5.2k
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1.5k
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Answer: A: New data transformation tool for Windows and Mac
3.6 years ago by Ido Tamir 5.2k
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2.0k
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Answer: A: RNA-Seq differential gene expression without biological and technical replicates
3.8 years ago by Ido Tamir 5.2k
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2.5k
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Answer: C: How to get DE genes without replicates using EdgeR
3.8 years ago by Ido Tamir 5.2k
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1
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1.0k
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Answer: A: How many of the reads end up being counted by HTSeq count
3.8 years ago by Ido Tamir 5.2k
1
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0
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1.3k
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Answer: A: How can I extract the sequencing reads containing a specific linker/tag?
3.9 years ago by Ido Tamir 5.2k
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0
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852
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Answer: A: Adding annotations to the bam file from the txt file
3.9 years ago by Ido Tamir 5.2k
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1
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1.2k
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Answer: A: HTseq does not generate any counts file
4.3 years ago by Ido Tamir 5.2k
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0
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2.0k
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Answer: A: How to average different rows of different groups?
updated 4.3 years ago by 43k • written 9.9 years ago by 5.2k
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0
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2.7k
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Answer: A: Overlaid XY plot with two different colors for control and target genes
updated 4.3 years ago by 43k • written 10.0 years ago by 5.2k
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1
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16k
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Answer: A: Binning Of Chromosome Data
updated 4.4 years ago by 43k • written 11.0 years ago by 5.2k
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1
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23k
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Answer: A: ggplot second y-axis: how to specify a secondary axis if I don't want to scale m
4.4 years ago by Ido Tamir 5.2k
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0
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2.9k
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Answer: A: NGS Data Storage Best Practices (Clinical)
4.4 years ago by Ido Tamir 5.2k
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9.5k
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Answer: A: Does Illumina Undetermined Fastq files contain barcodes
updated 4.4 years ago by 43k • written 8.4 years ago by 5.2k
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8.7k
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Answer: A: Number of aligned reads in exon, intron ...
updated 4.5 years ago by 43k • written 10.0 years ago by 5.2k
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4
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7.0k
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Answer: A: Non-Annotated Long Noncoding Rna Candidates
updated 4.6 years ago by 43k • written 12.6 years ago by 5.2k
4
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1
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4.2k
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Answer: A: Quick Visual Inspection Of Mapping Images For A List Of Regions
updated 4.6 years ago by 43k • written 12.8 years ago by 5.2k
3
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0
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1.9k
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Answer: A: More informative GSEA enrichment ggplot
4.6 years ago by Ido Tamir 5.2k
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0
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5.0k
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Answer: A: Rsamtools-Countoverlaps
updated 4.9 years ago by 43k • written 12.7 years ago by 5.2k
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4
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5.5k
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Answer: A: How To Create A Matrix In R?
updated 4.9 years ago by 43k • written 12.7 years ago by 5.2k
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0
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1.5k
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Answer: A: Statistics on differentially expressed genes
5.1 years ago by Ido Tamir 5.2k
2
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1
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11k
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Answer: A: How should I handle the raw reads with failed per base sequence content in fastQ
5.1 years ago by Ido Tamir 5.2k
3
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5.5k
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Answer: A: Extract overrepresented sequences from fastq or fastqc
5.2 years ago by Ido Tamir 5.2k
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1
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2.0k
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Answer: A: How to take out sequences with barcode?
5.2 years ago by Ido Tamir 5.2k
2
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9.7k
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Answer: A: How To Get Gene Regions +3Kb Upstream
updated 5.3 years ago by 43k • written 11.6 years ago by 5.2k
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5.1k
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Answer: A: FastQC:"Per Base Sequence Quality"
5.7 years ago by Ido Tamir 5.2k
2
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0
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4.3k
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Answer: A: Markduplicates in RNASEQ
6.3 years ago by Ido Tamir 5.2k
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1
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3.8k
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Answer: A: Paired end vs Single end Differential gene expression analysis
6.5 years ago by Ido Tamir 5.2k
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0
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2.0k
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Answer: A: ggplot expression values as function of samples and classes
6.7 years ago by Ido Tamir 5.2k
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1
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1.7k
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Answer: A: wrong bam file format
6.7 years ago by Ido Tamir 5.2k
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0
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3.0k
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Answer: A: FPKM vs READ COUNT
6.9 years ago by Ido Tamir 5.2k
3
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1
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2.2k
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Answer: A: R multiple parameters
7.0 years ago by Ido Tamir 5.2k
1
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1
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2.5k
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Answer: A: How to run Galaxy pipeline using a python code (is there a module, package for g
7.2 years ago by Ido Tamir 5.2k
1
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0
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2.4k
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Answer: A: read quality of sequence by fastqc
7.7 years ago by Ido Tamir 5.2k
3
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0
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2.9k
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Answer: A: Defining ChIP-seq target genes: is there a robust cut-off?
8.2 years ago by Ido Tamir 5.2k
4
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0
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15k
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Answer: Answer: Easiest way to convert python script to web application
updated 21 months ago by 43k • written 8.3 years ago by 5.2k
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0
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6.7k
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Answer: A: Bcl to fastq conversion problem in bcl2fastq-2.17
8.5 years ago by Ido Tamir 5.2k
1
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0
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1.8k
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Answer: Answer: Rnaseq calibration dataset
updated 19 months ago by 43k • written 8.6 years ago by 5.2k
0
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1
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3.5k
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Answer: Answer: Rank-based GO enrichment packages for R?
updated 19 months ago by 43k • written 8.6 years ago by 5.2k
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0
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3.5k
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Answer: Answer: a question about some "basic numbers" for rna-seq experiments
updated 16 months ago by 43k • written 8.8 years ago by 5.2k
2
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1
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3.3k
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Answer: A: What is the appropriate approach for ChIPseq protein genome occupancy % calculat
8.8 years ago by Ido Tamir 5.2k
1
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0
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3.3k
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Answer: Answer: Fundamental flaw in ngs.plot - how to overcome?C
updated 16 months ago by 43k • written 8.8 years ago by 5.2k
1
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1
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127k
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Answer: Answer: How to calculate "fold changes" in gene expression?
updated 14 months ago by 43k • written 9.0 years ago by 5.2k
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0
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1.6k
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Answer: Answer: skewed cuffdiff result
updated 14 months ago by 43k • written 9.0 years ago by 5.2k
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1
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3.0k
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Answer: Answer: Code for looking for overlaps
updated 21 months ago by 43k • written 9.0 years ago by 5.2k
1
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0
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8.6k
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Answer: Answer: htseq-count: -s reverse vs -s stranded
updated 22 months ago by 43k • written 9.0 years ago by 5.2k
2
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1
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2.2k
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Answer: A: Heat map with position
9.0 years ago by Ido Tamir 5.2k
1
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0
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1.6k
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Answer: Answer: Grouping\Clustering miRNAs in non-overlapped groups
updated 22 months ago by 43k • written 9.0 years ago by 5.2k
0
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0
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9.3k
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Answer: A: Chip-Seq - Peak caller for broad enrichment of histone modifications?
9.0 years ago by Ido Tamir 5.2k
1
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1
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2.1k
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Answer: A: Isaac Aligner with Solexa data fails
9.1 years ago by Ido Tamir 5.2k
167 results • Page 1 of 4
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