User: acros

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acros10
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1 year, 2 months ago
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Posts by acros

<prev • 9 results • page 1 of 1 • next >
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Answer: A: DiscoSnp becomes DiscoSnp++
... Hi Pierre, DISCOSNP++ seems to be exactly what I am looking for to call SNPs in microsatellite flanking regions for a coral species. However it doesn't seem to detect any SNPs even though I can visually seem them. I am wondering if the sequences are too short? I am inputing a fasta file with sequen ...
written 14 months ago by acros10
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DiscoSNP++ for flanking regions: how to create the input files?
... Hi, I am working with the flanking regions of microsatellites for a coral (no reference genome). I sequenced the microsatellites and then split the flanking regions from the tandem repeats. I now want to look for SNPs in these flanking regions. I am working with a large dataset: 25 sites with 48 in ...
genome snp sequencing written 15 months ago by acros10
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Comment: C: DiscoSnp++ Installation Problem
... Hi Pierre, I found the issue! My path changes when I move the folder. Thanks, Annick   ...
written 15 months ago by acros10
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Comment: C: DiscoSnp++ Installation Problem
... I think I found the issue. I'm moving my folder after unzipping it and it seems to change some of the path. I unzipped where I wanted the program to be and it works. ...
written 15 months ago by acros10
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Answer: A: DiscoSnp++ Installation Problem
... Hi Pierre, here it is   Compiling discoSnp, from directory /Users/annickcros/programs/DiscoSNP++-2.2.4-Darwin mkdir: build: File exists ===> CMAKE_MODULE_PATH= CMake Error at CMakeLists.txt:33 (include): include could not find load file: GatbCore CMake Error at CMakeLists.txt:72 (INCLUDE): incl ...
written 15 months ago by acros10
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Comment: C: DiscoSnp++ Installation Problem
... Hi Pierre, here it is   Compiling discoSnp, from directory /Users/annickcros/programs/DiscoSNP++-2.2.4-Darwin mkdir: build: File exists ===> CMAKE_MODULE_PATH= CMake Error at CMakeLists.txt:33 (include): include could not find load file: GatbCore CMake Error at CMakeLists.txt:72 (INCLUDE): incl ...
written 15 months ago by acros10
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Answer: A: DiscoSnp++ Installation Problem
... Hi, I'm trying to install DiscoSnp++2.2.4 on a Mac OS 10.11.2. I'm having the same issues as Solhan2000 withe compilation error. Has this been resolved? Is it an issue in the CMakeLists? Thanks for the help, Annick ...
written 15 months ago by acros10
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Answer: A: DiscoSNP++ compilation problem
... Hi, I have the exact same error as the one from this thread. I wanted to know if this was ever solved? Thanks, Annick   ...
written 15 months ago by acros10
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Answer: A: DiscoSNP++ compilation problem
... Hi, I have the exact same error as the one from this thread. I wanted to know if this was ever solved? Thanks, Annick   ...
written 15 months ago by acros10

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