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Comment: Comment: monocle single cell differential expression: error message for HSMM <- estimateD
2.3 years ago by benformatics 4.2k
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1
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2.4k
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Comment: Comment: gene id
2.4 years ago by benformatics 4.2k
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2.4k
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Comment: Comment: gene id
2.4 years ago by benformatics 4.2k
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1.1k
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Answer: Answer: 3' Single Cell RNA Seq Reads mapping to promoter region of gene
2.4 years ago by benformatics 4.2k
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2.1k
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Comment: Comment: Analize RNA-seq data using Hisat2
2.4 years ago by benformatics 4.2k
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1.7k
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Comment: Comment: Filtering mitochondrial reads from ATAC-Seq aligned reads- what to do with reads
2.4 years ago by benformatics 4.2k
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1.4k
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Comment: Comment: Is the gene-specific PCR efficiency a serious concern for intrasample comparison
2.5 years ago by benformatics 4.2k
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1
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2.2k
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Comment: Comment: error in Genome Mepping by BWA tools in Linux
2.5 years ago by benformatics 4.2k
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1.3k
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Answer: Answer: Fastqs different lanes
2.5 years ago by benformatics 4.2k
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1.5k
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Comment: Comment: Chance that DNA with 3N nucleotide encodes 2 protein with size of N amino-acids
2.5 years ago by benformatics 4.2k
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2.3k
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Comment: Comment: How do I project known tSNE coordinates onto SeuratObject
2.5 years ago by benformatics 4.2k
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1
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2.3k
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Answer: Answer: How do I project known tSNE coordinates onto SeuratObject
2.5 years ago by benformatics 4.2k
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1
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1.5k
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Comment: Comment: Chance that DNA with 3N nucleotide encodes 2 protein with size of N amino-acids
2.5 years ago by benformatics 4.2k
0
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1
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8.4k
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Comment: Comment: I want to correct the erroneous barcode file, and the Python code that I've writ
2.5 years ago by benformatics 4.2k
1
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1
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8.4k
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Comment: Comment: I want to correct the erroneous barcode file, and the Python code that I've writ
2.5 years ago by benformatics 4.2k
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0
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1.9k
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Comment: Comment: Remove string from Seurat object metadata
2.5 years ago by benformatics 4.2k
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1
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1.9k
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Answer: Answer: Remove string from Seurat object metadata
2.5 years ago by benformatics 4.2k
1
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1
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8.4k
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Comment: Comment: I want to correct the erroneous barcode file, and the Python code that I've writ
2.5 years ago by benformatics 4.2k
0
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1
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8.6k
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Comment: Comment: What are the advantages of using the T2T as a reference vs GRCh38 today?
2.5 years ago by benformatics 4.2k
0
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0
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1.2k
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Comment: Comment: Merged BAM has more reads than sum of parts
2.6 years ago by benformatics 4.2k
0
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1
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3.2k
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Comment: Comment: Can you swap reference genome releases ?
2.6 years ago by benformatics 4.2k
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1.3k
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Comment: Comment: Non-zero expression counts from deleted genes
2.6 years ago by benformatics 4.2k
0
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0
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1.2k
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Comment: Comment: R script error R aborted or encountered a fatal error
2.6 years ago by benformatics 4.2k
0
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1
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1.3k
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Comment: Comment: Non-zero expression counts from deleted genes
2.6 years ago by benformatics 4.2k
0
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0
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1.6k
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Answer: Answer: divide coordinates into equal number of bins
2.6 years ago by benformatics 4.2k
0
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0
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2.1k
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Answer: Answer: How to get fraction of unspliced reads for specific gene from scRNAseq Cell Rang
2.6 years ago by benformatics 4.2k
1
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0
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3.4k
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Answer: Answer: Recommendation for (Alternative) Splicing analysis packages for bulk RNA-seq da
2.6 years ago by benformatics 4.2k
3
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0
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1.3k
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Comment: Comment: advice on course selection for a bioinformatics career.
2.6 years ago by benformatics 4.2k
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0
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1.2k
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Comment: Comment: Processing fastqs generated by inDrop protocol
2.6 years ago by benformatics 4.2k
1
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0
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2.1k
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Comment: Comment: samtools idxstats not removing ChrM
2.6 years ago by benformatics 4.2k
0
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1
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1.2k
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Comment: Comment: Problem in converting SAM to BAM file by DROP SEQ
2.6 years ago by benformatics 4.2k
1
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0
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2.1k
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Comment: Comment: samtools idxstats not removing ChrM
2.6 years ago by benformatics 4.2k
0
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0
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4.8k
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Comment: Comment: How does 10x Genomics 3' single cell data have reads aligning to exons that aren
2.6 years ago by benformatics 4.2k
0
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1
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1.3k
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Comment: Comment: CABSDock:fortran 2018 deleted feature
2.7 years ago by benformatics 4.2k
1
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0
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1.1k
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Answer: Answer: RNA seq analysis differential expression analysis
2.7 years ago by benformatics 4.2k
1
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1
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981
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Comment: Comment: Bar plots at genera level with absolute percentage difference between two groups
2.7 years ago by benformatics 4.2k
0
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1
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8.7k
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Comment: Comment: GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment
updated 17 months ago by 45k • written 2.7 years ago by 4.2k
0
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1
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8.7k
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Comment: Comment: GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment
updated 17 months ago by 45k • written 2.7 years ago by 4.2k
0
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1
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8.7k
views
Comment: Comment: GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment
2.7 years ago by benformatics 4.2k
0
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1
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8.7k
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Answer: Answer: GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment
17 months ago by benformatics 4.2k
0
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0
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1.4k
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Comment: Comment: RNAseq matrix containing zero values
2.7 years ago by benformatics 4.2k
0
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0
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1.1k
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Answer: Answer: Mate-pair sequencing
2.8 years ago by benformatics 4.2k
0
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0
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3.0k
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Comment: Comment: change color and scale in SpatialFeaturePlot
2.8 years ago by benformatics 4.2k
0
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1
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2.2k
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Comment: Comment: Some questions on RAD paired-end sequencing
2.8 years ago by benformatics 4.2k
0
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1
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2.2k
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Answer: Answer: Some questions on RAD paired-end sequencing
2.8 years ago by benformatics 4.2k
0
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0
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2.7k
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Comment: Comment: How to remove un-paired reads from BAM after filtering?
2.8 years ago by benformatics 4.2k
3
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5
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2.7k
views
How to remove un-paired reads from BAM after filtering?
picard samtools
updated 2.4 years ago by 45k • written 2.8 years ago by 4.2k
2
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1
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2.7k
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Answer: Answer: How to remove un-paired reads from BAM after filtering?
2.8 years ago by benformatics 4.2k
0
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1
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2.7k
views
Comment: Comment: How to remove un-paired reads from BAM after filtering?
2.8 years ago by benformatics 4.2k
1
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0
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1.7k
views
Comment: Comment: What exactly are unmappable regions?
2.8 years ago by benformatics 4.2k
503 results • Page 2 of 11
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