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Answer: Answer: Help speeding up HMMER's HMMSearch algorithm for large fasta file with GNU Paral
10 months ago by lieven.sterck 15k
1
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718
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Answer: Answer: Including "no significant hits" in output of local blastn searches
11 months ago by lieven.sterck 15k
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0
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659
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Answer: Answer: Making masked blast db
11 months ago by lieven.sterck 15k
2
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1
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586
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Answer: Answer: How to get gene from PSIBLAST resuts
12 months ago by lieven.sterck 15k
2
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1
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998
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Answer: Answer: Exon and junctions count per gene
18 months ago by lieven.sterck 15k
3
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0
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704
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Answer: Answer: how to duplicate a column in different files with bash
19 months ago by lieven.sterck 15k
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0
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673
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Answer: Answer: why appears transcritps with 0 expression if it was used for the novo transcript
19 months ago by lieven.sterck 15k
2
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1
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1.8k
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Answer: Answer: Blast "Argument "query". File is not accessible:" Error
19 months ago by lieven.sterck 15k
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737
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Answer: Answer: Very low % of RNAseq reads mapped using STAR
19 months ago by lieven.sterck 15k
3
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2
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2.8k
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Answer: Answer: How to count unique occurrences of lines in Linux [closed]
19 months ago by lieven.sterck 15k
2
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1
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1.3k
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Answer: Answer: Count specific sequences in a .fasta file
19 months ago by lieven.sterck 15k
2
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1
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592
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Answer: Answer: replace the NP* accession in header of the fasta file with gene name using GFF f
19 months ago by lieven.sterck 15k
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510
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Answer: Answer: Create library of TEs de novo
20 months ago by lieven.sterck 15k
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1.1k
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Answer: Answer: Extracting genes coded by a region of a chromosome
20 months ago by lieven.sterck 15k
2
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1
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570
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Answer: Answer: Sequence duplication FASTQC - genome sequencing
21 months ago by lieven.sterck 15k
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390
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Answer: Answer: high frequency subsequences
21 months ago by lieven.sterck 15k
1
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1.7k
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Answer: Answer: Quick download of FASTQ
21 months ago by lieven.sterck 15k
1
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1
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1000
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Answer: Answer: Incomplete alignment EMBOSS needleall
21 months ago by lieven.sterck 15k
1
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0
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695
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Answer: Answer: Extract sequence from Fasta using header
22 months ago by lieven.sterck 15k
1
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1
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632
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Answer: Answer: BLAST IN CLC vs BLAST IN NCBI website
22 months ago by lieven.sterck 15k
2
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0
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626
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Answer: Answer: What is the best tool to do a dot-plot alignment of two chromosomes?
22 months ago by lieven.sterck 15k
2
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0
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374
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Answer: Answer: Swiss-prot and pfam
22 months ago by lieven.sterck 15k
4
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1
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622
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Answer: Answer: Automatize alignment and sorting
22 months ago by lieven.sterck 15k
2
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1
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1.2k
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Answer: Answer: How to separate the name and date of FASTA sequence header with spaces in the
22 months ago by lieven.sterck 15k
0
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435
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Answer: Answer: multiple Sequence Alignment tools for cis-element
22 months ago by lieven.sterck 15k
5
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545
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Answer: Answer: Repeat Masking step is really important on Low coverage genomes (~9x-30X) ?
22 months ago by lieven.sterck 15k
2
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2
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961
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Answer: Answer: Where can I find single cell genome sequencing?
22 months ago by lieven.sterck 15k
1
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1
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900
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Answer: Answer: What the purpose of compare gene tree and species topologies?
22 months ago by lieven.sterck 15k
4
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1
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1.2k
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Answer: Answer: How to obtain 200 bp flanking sequence from both sides of BLAST search?
22 months ago by lieven.sterck 15k
0
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1
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1.2k
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Answer: Answer: Extracting fasta fsequences based on headlists
22 months ago by lieven.sterck 15k
1
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2
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1.3k
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Answer: Answer: Trinity genome-guided
22 months ago by lieven.sterck 15k
2
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1
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759
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Answer: Answer: How to perform differential gene expression analysis with only one replicate in
22 months ago by lieven.sterck 15k
1
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1
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1.3k
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Answer: Answer: when should I merge in annotation transdecoder pipeline
23 months ago by lieven.sterck 15k
3
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1
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886
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Answer: Answer: Trimming RNAseq data for transcriptome assembly
23 months ago by lieven.sterck 15k
3
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982
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Answer: Answer: BUSCO results vs. Orthofinder
23 months ago by lieven.sterck 15k
2
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0
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3.9k
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Answer: Answer: outfmt 6 BLAST column names
23 months ago by lieven.sterck 15k
0
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2
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672
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Answer: Answer: Taxonomic annotation of selected genes
23 months ago by lieven.sterck 15k
1
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0
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621
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Answer: Answer: Which sequences have to be used for prediction of orthologs, CDS or assembled c
23 months ago by lieven.sterck 15k
0
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1
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1.5k
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Answer: Answer: Find a gene of interest in a species genome
24 months ago by lieven.sterck 15k
2
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1
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965
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Answer: Answer: All vs All blast not self hit? Orthogroup clustering and single copy genome?
24 months ago by lieven.sterck 15k
1
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1
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823
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Answer: Answer: Error message in Standalone BLAST
2.0 years ago by lieven.sterck 15k
2
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1
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962
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Answer: Answer: extract ALL mapped paired-end reads from BAM file
2.0 years ago by lieven.sterck 15k
1
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0
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742
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Answer: Answer: Split DNA sequences from 150pb to 75 pb
2.0 years ago by lieven.sterck 15k
0
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1
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1.3k
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Answer: Answer: annotation of bin to get gene ID
2.0 years ago by lieven.sterck 15k
1
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1
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694
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Answer: Answer: Repeat masked vs Repeat unmasked genome assembly
2.0 years ago by lieven.sterck 15k
0
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1
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615
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Answer: Answer: How to get nucleotidic sequence from a protein fasta file?
2.0 years ago by lieven.sterck 15k
1
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0
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904
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Answer: Answer: How to Modify Reference Sequence and Annotation Files
2.0 years ago by lieven.sterck 15k
0
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0
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368
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Answer: Answer: Difference between usage of TopHat in Galaxy Europe and through linux terminal
2.1 years ago by lieven.sterck 15k
4
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1
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643
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Answer: Answer: FASTQ quality check
2.1 years ago by lieven.sterck 15k
1
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1
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1.2k
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Answer: Answer: preformatted bastdb nt volume/alias file missing
2.1 years ago by lieven.sterck 15k
470 results • Page 1 of 10
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