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Showing :
questions
3
votes
6
replies
8.6k
views
Trim galore terminates with exit signal: '256'
trim_galore
cutadapt
updated 6.3 years ago by
ZheFrench
▴ 550 • written 7.8 years ago by
Sinji
★ 3.2k
6
votes
6
replies
6.4k
views
ChromHMM Output Descriptions
ChromHMM
updated 6.3 years ago by
Roman Hillje
▴ 90 • written 7.6 years ago by
Sinji
★ 3.2k
4
votes
7
replies
5.7k
views
Identifying the orientation of a CTCF motif?
CTCF
ChIP-Seq
updated 6.4 years ago by
simon.vanheeringen
▴ 260 • written 6.4 years ago by
Sinji
★ 3.2k
1
vote
4
replies
3.3k
views
BBMap: Number of reads out does not add up to number of reads in
bbmap
6.8 years ago by
Sinji
★ 3.2k
3
votes
7
replies
2.5k
views
Does BBMap not include headers in BAM files?
bbmap
6.9 years ago by
Sinji
★ 3.2k
1
vote
4
replies
1.3k
views
How to make a RNA-seq pipeline universal?
RNA-Seq
7.3 years ago by
Sinji
★ 3.2k
8
votes
10
replies
4.1k
views
How to keep information from both files when I intersect them?
bedops
updated 7.4 years ago by
ssv.bio
▴ 200 • written 7.4 years ago by
Sinji
★ 3.2k
2
votes
5
replies
2.0k
views
Nucleosome Peak Callers
mnase
peak callers
danpos2
inps
updated 7.5 years ago by
Carlo Yague
8.6k • written 7.5 years ago by
Sinji
★ 3.2k
8
votes
4
replies
2.2k
views
How to quickly obtain a BED file of genes using their gene symbols?
ChIP-Seq
bed
gene symbol
updated 7.6 years ago by
Alex Reynolds
35k • written 7.6 years ago by
Sinji
★ 3.2k
1
vote
1
reply
2.4k
views
Determining the relationship between putative enhancer activity and it's associated gene activity
project
ChIP-Seq
RNA-Seq
enhancers
genes
updated 7.9 years ago by
jotan
★ 1.3k • written 7.9 years ago by
Sinji
★ 3.2k
4
votes
7
replies
3.3k
views
Calculating fold change at enhancers and promoters
RNA-Seq
fold change
updated 7.9 years ago by
Bogdan
★ 1.4k • written 7.9 years ago by
Sinji
★ 3.2k
2
votes
2
replies
5.0k
views
Using 'tximport' library for downstream DGE after quantifying with Kallisto
RNA-Seq
Kallisto
tximport
R
updated 7.9 years ago by
Michael Love
★ 2.6k • written 7.9 years ago by
Sinji
★ 3.2k
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