User: HZZ0036

gravatar for HZZ0036
HZZ00360
Reputation:
0
Status:
New User
Last seen:
7 months ago
Joined:
3 years, 10 months ago
Email:
H******@auburn.edu

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by HZZ0036

<prev • 26 results • page 1 of 3 • next >
0
votes
2
answers
2.3k
views
2
answers
Comment: C: MCScanX result problem
... No 发自我的 iPhone 在 2019年10月23日,下午7:25,venura on Biostar <mailer@biostars.org<a rel="nofollow" href="mailto:mailer@biostars.org">mailer@biostars.org> 写道: Activity on a post you are following on Biostarhttp://www.biostars.org User venuravenura wrote Comment: MCScanX result problemC: MCSc ...
written 12 weeks ago by HZZ00360
0
votes
1
answer
1.7k
views
1
answers
Comment: C: Calculation of LD decay value in GWAS
... Hi, I used PopLDdecay, but the output figure is not a curve. ...
written 7 months ago by HZZ00360
0
votes
0
answers
415
views
0
answers
Comment: C: How to merge several FPKM files?
... Could you please tell me why? I need to get FPKM values to do gene co-expression analysis. ...
written 12 months ago by HZZ00360
0
votes
0
answers
415
views
0
answers
Comment: C: How to merge several FPKM files?
... The results like this: gene_id trans_256 trans_255 0 arahy.Tifrunner.gnm1.ann1.0002EG 0.000000 0.000000 1 arahy.Tifrunner.gnm1.ann1.0008XH 0.098323 0.069357 2 arahy.Tifrunner.gnm1.ann1.004CIH 2.316410 NaN 3 arahy.Tifrunner.gnm1.a ...
written 12 months ago by HZZ00360
0
votes
0
answers
415
views
0
answers
Comment: C: How to merge several FPKM files?
... I have tried Python: import glob import pandas as pd import numpy as np # path = open(r'C:\Users\Desktop\test') glob.glob("a*.xlsx") all_data = pd.DataFrame() for f in glob.glob("a2.xlsx"): df = pd.read_excel(f) all_data = all_data.append(d ...
written 12 months ago by HZZ00360
0
votes
0
answers
415
views
0
answers
How to merge several FPKM files?
... Hi, I have 8 transcriptome samples. After mapping transcriptome reads to genome and ran cufflinks, I get FPKM results like: gene_id trans_255FPKM arahy.Tifrunner.gnm1.ann1.0002EG 0 arahy.Tifrunner.gnm1.ann1.0008XH 0.0693565 arahy.Tifrunner.gnm1.ann1.0046K4 0.173405 arahy.Tifru ...
alignment rna-seq written 12 months ago by HZZ00360
0
votes
2
answers
2.3k
views
2
answers
Comment: C: MCScanX result problem
... Hi! I used SyMAP instead of MCScan. ...
written 13 months ago by HZZ00360
0
votes
1
answer
1.5k
views
1
answer
How to plot Orthofinder results?
... Hi everyone, I ran Orthofinder for six plant genomes and got some results, which include a lot of statistics. I only made a phylogenetic tree for those species, but I don't know how to plot other results? How to use those results to do some gene family analyses? Here is the information from the man ...
genome written 23 months ago by HZZ00360 • updated 22 months ago by david_emms100
0
votes
2
answers
429
views
5 follow
2
answers
(Closed) Sed problem to change names
... Hi, I want to use 'Sed' to change the names in both sequences and annotation files. Such as change scaffold1_size2426064 exon scaffold2_size1571916 exon scaffold3_size1509833 gene scaffold4_size1453470 scaffold5_size1243770 scaffold6_size1253778 scaffold7_size1219719 ...
sequence written 23 months ago by HZZ00360 • updated 23 months ago by Federico Lopez20
0
votes
0
answers
746
views
0
answers
Comment: C: Error about Count_fasta.pl
... Thank you. It worked for a subset of the file, but it still didn't work for all of the file. I didn't meet this situation before. It's very strange. ...
written 2.2 years ago by HZZ00360

Latest awards to HZZ0036

Popular Question 11 months ago, created a question with more than 1,000 views. For Change trinity fasta header sequence ID's
Popular Question 19 months ago, created a question with more than 1,000 views. For Change trinity fasta header sequence ID's
Popular Question 19 months ago, created a question with more than 1,000 views. For errors from evidentialgene pipeline
Popular Question 20 months ago, created a question with more than 1,000 views. For Change trinity fasta header sequence ID's
Popular Question 23 months ago, created a question with more than 1,000 views. For Change trinity fasta header sequence ID's

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1389 users visited in the last hour