Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
17k
views
Answer: A: TMM or TPM normalized counts for visualization?
4.5 years ago by simplitia ▴ 130
1
vote
2
replies
1.6k
views
STAR: Is it ok to align with an index created from genecode but count features from gtf from ensembl?
RNA-Seq STAR alignment
updated 4.6 years ago by ★ 4.0k • written 4.6 years ago by ▴ 130
0
votes
0
replies
555
views
How to interpret exon reads from recount for version 2?
RNA-Seq TCGA
4.7 years ago by simplitia ▴ 130
0
votes
0
replies
2.7k
views
Answer: A: SOAPfuse: problem in constructing database
4.8 years ago by simplitia ▴ 130
0
votes
0
replies
930
views
Advice for gene overlap with direction between two sets.
R chisquare statistics
5.0 years ago by simplitia ▴ 130
0
votes
1
reply
1.5k
views
Comment: C: Understanding FANTOM5 CAGE fields
5.2 years ago by simplitia ▴ 130
2
votes
3
replies
1.5k
views
Understanding FANTOM5 CAGE fields
RNA-Seq transcription tss
updated 5.2 years ago by ★ 4.0k • written 5.2 years ago by ▴ 130
0
votes
1
reply
1.5k
views
Help convert GDC exploration url to API download?
gdc mutation portal
updated 5.3 years ago by 20 • written 5.4 years ago by ▴ 130
0
votes
0
replies
183k
views
Comment: A: How to download raw sequence data from GEO/SRA
updated 5.3 years ago by 43k • written 6.2 years ago by ▴ 130
0
votes
1
reply
130k
views
Comment: C: from .BAM to .BAI using samtools
5.3 years ago by simplitia ▴ 130
0
votes
0
replies
4.0k
views
Comment: C: How to recreate FASTQ from BAM
5.4 years ago by simplitia ▴ 130
2
votes
4
replies
4.0k
views
How to recreate FASTQ from BAM
RNA-Seq BAM sequencing
updated 5.4 years ago by ▴ 310 • written 5.4 years ago by ▴ 130
9
votes
6
replies
3.7k
views
Hard time trying to calculate Allele Frequency and DP from Platypus
RNA-Seq SNV
updated 5.6 years ago by 87k • written 6.3 years ago by ▴ 130
1
vote
0
replies
10k
views
Comment: C: Converting large (compressed and unsorted) BAM files to fastq
5.8 years ago by simplitia ▴ 130
2
votes
1
reply
1.8k
views
How to deconvolute whole blood and analyzed cell type separately for EWAS
methylation cpg 850K EPIC
updated 6.2 years ago by 87k • written 6.2 years ago by ▴ 130
1
vote
0
replies
2.4k
views
Comment: C: How to quantify PCR duplication from bam file
6.3 years ago by simplitia ▴ 130
1
vote
2
replies
2.4k
views
How to quantify PCR duplication from bam file
RNA-Seq
updated 6.3 years ago by 141k • written 6.3 years ago by ▴ 130
0
votes
0
replies
3.7k
views
Comment: C: Hard time trying to calculate Allele Frequency and DP from Platypus
6.3 years ago by simplitia ▴ 130
1
vote
1
reply
3.7k
views
Comment: C: Hard time trying to calculate Allele Frequency and DP from Platypus
updated 6.3 years ago by 87k • written 6.3 years ago by ▴ 130
0
votes
0
replies
3.1k
views
Comment: C: Help with BWA: how to align paired as single and then combine again
6.4 years ago by simplitia ▴ 130
0
votes
1
reply
3.1k
views
Comment: C: Help with BWA: how to align paired as single and then combine again
6.4 years ago by simplitia ▴ 130
0
votes
0
replies
3.1k
views
Comment: C: Help with BWA: how to align paired as single and then combine again
6.4 years ago by simplitia ▴ 130
0
votes
1
reply
3.1k
views
Comment: C: Help with BWA: how to align paired as single and then combine again
6.4 years ago by simplitia ▴ 130
0
votes
8
replies
3.1k
views
Help with BWA: how to align paired as single and then combine again
RNA-Seq alignment bwa
6.4 years ago by simplitia ▴ 130
0
votes
0
replies
1.7k
views
Create fusion transcripts with breakpoint coordinates from two genes.
RNA-Seq sequence
8.1 years ago by simplitia ▴ 130
75 results • Page 2 of 2
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6