User: segato.felipe

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Posts by segato.felipe

<prev • 3 results • page 1 of 1 • next >
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Answer: A: Batch Adjusted counts for Downstream Analysis
... Hello, You could use combat to correct for batch effects, remove genes absent in most samples and perform your DE analysis using a statistical test. We did this in our paper: (https://www.sciencedirect.com/science/article/pii/S221112471931455X) ...
written 8 months ago by segato.felipe20
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Answer: A: Which genome browser to use for my data?
... That's a great document. Thanks for sharing! Just to add to this, I like the WashU Epigenome Browser (http://epigenomegateway.wustl.edu/browser/) to visualize interaction data (HiC, HiChIP, etc) ...
written 8 months ago by segato.felipe20
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Answer: A: How to plot 2 different shapes in 3D PCA plots generated by rgl plot3D
... Hey, Since you're using R, I'd recommend the package "plot3D". It's a very flexible and easy to use package where you can do what you're looking for easily. ...
written 8 months ago by segato.felipe20

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