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Comment: Comment: 8 Million SNPs in Whole Exome Sequencing vcf file
4.0 years ago by Sam ★ 4.8k
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Answer: Answer: Using IMPUTED genotype data from UK Biobank to generate PRS scores using PRSice
4.0 years ago by Sam ★ 4.8k
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Answer: Answer: shell --- while
4.0 years ago by Sam ★ 4.8k
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Answer: Answer: shell --array in while loop
4.0 years ago by Sam ★ 4.8k
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Comment: Comment: GWAS Studies
4.0 years ago by Sam ★ 4.8k
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5.6k
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Comment: Comment: PLINK basic command line usage
4.1 years ago by Sam ★ 4.8k
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7.1k
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Comment: Comment: PRS in UK Biobank - no covariate file and no phenotype file
4.1 years ago by Sam ★ 4.8k
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Comment: Comment: PGS Catalog file does not have rsID
4.1 years ago by Sam ★ 4.8k
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7.1k
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Comment: Comment: PRS in UK Biobank - no covariate file and no phenotype file
4.1 years ago by Sam ★ 4.8k
0
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1
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7.1k
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Comment: Comment: PRS in UK Biobank - no covariate file and no phenotype file
4.1 years ago by Sam ★ 4.8k
0
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1
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7.1k
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Comment: Comment: PRS in UK Biobank - no covariate file and no phenotype file
4.1 years ago by Sam ★ 4.8k
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1.6k
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Comment: Comment: PRS from a dataset on which the GWAS is based on
4.1 years ago by Sam ★ 4.8k
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1.6k
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Answer: Answer: PRS from a dataset on which the GWAS is based on
4.1 years ago by Sam ★ 4.8k
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7.1k
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Comment: Comment: PRS in UK Biobank - no covariate file and no phenotype file
4.1 years ago by Sam ★ 4.8k
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4.2k
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Comment: Comment: PRS using PGS Catalog
4.1 years ago by Sam ★ 4.8k
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7.1k
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Answer: Answer: PRS in UK Biobank - no covariate file and no phenotype file
4.1 years ago by Sam ★ 4.8k
2
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0
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1.3k
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Answer: Answer: Remove text and add a string in odd rows in a fasta file using awk
4.1 years ago by Sam ★ 4.8k
1
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1.5k
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Answer: Answer: Polygenic Risk Score Plot
4.2 years ago by Sam ★ 4.8k
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0
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2.8k
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Comment: Comment: How get Genetic Positions of SNPs?
4.2 years ago by Sam ★ 4.8k
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1
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2.5k
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Comment: Comment: PRSice "command not found"
4.2 years ago by Sam ★ 4.8k
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2.0k
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Comment: Comment: GWASpower calculation
4.2 years ago by Sam ★ 4.8k
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Comment: Comment: Can KING relatedness software be set to ignore FID?
4.2 years ago by Sam ★ 4.8k
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1
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2.8k
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Comment: Comment: How get Genetic Positions of SNPs?
4.2 years ago by Sam ★ 4.8k
0
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2.5k
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Comment: Comment: PRSice "command not found"
4.2 years ago by Sam ★ 4.8k
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1
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2.8k
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Comment: Comment: How get Genetic Positions of SNPs?
4.2 years ago by Sam ★ 4.8k
1
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1.5k
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Answer: Answer: extracting a gene from a gmt file
4.2 years ago by Sam ★ 4.8k
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2.2k
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Comment: Comment: What does .bim .bed .fam stands for?
4.2 years ago by Sam ★ 4.8k
1
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1.2k
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Answer: Answer: PLINK ASSOC understanding the results
4.2 years ago by Sam ★ 4.8k
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1
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7.3k
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Comment: Comment: Trying to read multiple CSV files in a folder and add filename to each column in
4.2 years ago by Sam ★ 4.8k
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1
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7.3k
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Answer: Answer: Trying to read multiple CSV files in a folder and add filename to each column in
4.2 years ago by Sam ★ 4.8k
2
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1
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3.2k
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Answer: Answer: How to replace multiple string columns to binary values (0 and 1) in a dataframe
4.2 years ago by Sam ★ 4.8k
1
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1
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2.8k
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Comment: Comment: color coded PCA plot in R for a combined set
4.3 years ago by Sam ★ 4.8k
2
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1
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2.8k
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Answer: Answer: color coded PCA plot in R for a combined set
4.3 years ago by Sam ★ 4.8k
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1
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4.6k
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Answer: Answer: How to calculate R2 from GWAS summary statistics?
4.3 years ago by Sam ★ 4.8k
3
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1.2k
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Answer: Answer: Covariates didn't change GWAS too much?
4.3 years ago by Sam ★ 4.8k
2
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0
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6.1k
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Comment: Comment: R ---issues. on server. BiocManager", "genefilter"
4.3 years ago by Sam ★ 4.8k
0
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0
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2.3k
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Comment: Comment: Which GWGAS Tool is 'better', MAGMA or LDSC?
4.3 years ago by Sam ★ 4.8k
1
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1
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2.3k
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Answer: Answer: Which GWGAS Tool is 'better', MAGMA or LDSC?
4.3 years ago by Sam ★ 4.8k
0
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1
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6.1k
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Comment: Comment: R ---issues. on server. BiocManager", "genefilter"
4.3 years ago by Sam ★ 4.8k
2
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0
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1.8k
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Comment: Comment: how to sort the rows of a file as a matrix?
4.3 years ago by Sam ★ 4.8k
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0
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2.6k
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Answer: Answer: How to view if a gene is protein-coding?
4.3 years ago by Sam ★ 4.8k
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2
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3.3k
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Comment: Comment: slurm error
4.3 years ago by Sam ★ 4.8k
2
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1
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1.5k
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Answer: Answer: plink2 cannot identify options when looping the chromosomes
4.4 years ago by Sam ★ 4.8k
0
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0
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11k
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Comment: Comment: How to find Standard Error (SE) values when not provided in GWAS summary stats?
4.4 years ago by Sam ★ 4.8k
0
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1
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11k
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Comment: Comment: How to find Standard Error (SE) values when not provided in GWAS summary stats?
4.4 years ago by Sam ★ 4.8k
2
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0
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1.1k
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Answer: Answer: Obtaining all independent SNPs
4.4 years ago by Sam ★ 4.8k
0
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0
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2.1k
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Comment: Comment: How to change my SNP Id format from chr1_847228_C_T to chr1_847228 in my .bim
4.4 years ago by Sam ★ 4.8k
2
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1
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2.1k
views
Answer: Answer: How to change my SNP Id format from chr1_847228_C_T to chr1_847228 in my .bim
4.4 years ago by Sam ★ 4.8k
0
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1
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2.0k
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Answer: Answer: PGS Catalog file does not have rsID
4.4 years ago by Sam ★ 4.8k
1
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0
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3.5k
views
Comment: Comment: Preparing Target Data
4.4 years ago by Sam ★ 4.8k
651 results • Page 3 of 14
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