User: ahm3dhany

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ahm3dhany10
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Posts by ahm3dhany

<prev • 18 results • page 2 of 2 • next >
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Comment: C: question about API for SNPs
... the main problem is there is no phenotype (e.g. for Rs4988235, CC: likely to be lactose intolerant as an adult. CT: likely to be able to digest milk as an adult. TT: can digest milk.) I want an API that give me something like this: (the screenshot is from SNPedia) ![enter image description here][1 ...
written 3.5 years ago by ahm3dhany10
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Comment: C: question about API for SNPs
... the main problem is there is no phenotype (e.g. for Rs4988235, CC: likely to be lactose intolerant as an adult. CT: likely to be able to digest milk as an adult. TT: can digest milk.) I want an API that give me something like this: (the screenshot is from SNPedia) ![enter image description here][1] ...
written 3.5 years ago by ahm3dhany10
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Comment: C: where can i find chromosomes dataset for individuals ?
... some operations related to SNPs (genotype to phenotype for example). ...
written 3.5 years ago by ahm3dhany10
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question about API for SNPs
... Is there any API that i can send to it the rsID (e.g. rs4988235) and the API respond with the position (i.e. chromosome number and position of the nucleotide) and the effect related to this rsID (e.g. for Rs4988235, CC: likely to be lactose intolerant as an adult. CT: likely to be able to digest mil ...
api snp genotype phenotype written 3.5 years ago by ahm3dhany10 • updated 3.5 years ago by Denise - Open Targets5.0k
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where can i find chromosomes dataset for individuals ?
... i downloaded the reference chromosomes (1 to 22, X & Y) but i wonder where can i find chromosomes dataset for individuals ? ...
dataset genotype snp written 3.6 years ago by ahm3dhany10 • updated 3.6 years ago by WouterDeCoster42k
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Comment: C: prostate cancer detection question
... first of all thanks, i appreciate your help! :) another question, i download the GRCh38. and i found "AT" !! not CC or CT or TT so i am confused. :/ look here: http://www.ncbi.nlm.nih.gov/variation/view/?q=rs10993994&filters=source:dbsnp&assm=GCF_000001405.28 can u help me please. ...
written 3.6 years ago by ahm3dhany10
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prostate cancer detection question
... SNP: rs10993994 linked to prostate cancer, info here says: at chromosome 10, position 46046326: if "CC" ==> Mag=0 (i.e. good) else if "CT" ==> Mag=1.5 & increased prostate cancer risk (odds ratio 1.2) else if "TT" ==> Mag=2 & increased prostate cancer risk (odds ratio 1.6) ...
genome snp genotype phenotype dna written 3.6 years ago by ahm3dhany10
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Determine characteristics(phenotype) from genomes
... I'am computer science & engineering student & I'm currently working on my final project which related to genomics. I am applying big-data analytics on genomic field. My question is, I want a clear demonstration of how could I find the characteristics(such as race, eye color, skin color, hai ...
bioinformatics biology dna big data programming written 3.7 years ago by ahm3dhany10

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