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Comment: Comment: Finding insert sequences using long reads
16 days ago by Anand Rao ▴ 630
2
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5
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2.7k
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primer design to discriminate sequences in intron-exon MSA
primer MSA intron-exon
updated 20 days ago by • 0 • written 6.6 years ago by ▴ 630
16
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7
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6.1k
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6 follow
rRNA decontamination of RNA-Seq reads (tool choice, introns etc)
rRNA intron RNA-Seq bbsuite sormeRNA
updated 14 months ago by 141k • written 4.4 years ago by ▴ 630
0
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0
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333
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off-target predictions to prioritize list of sgRNA designs
sgRNA CRISPR CHOPCHOP
2.1 years ago by Anand Rao ▴ 630
0
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0
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2.4k
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Comment: Comment: PDB file pairwise alignment software choice
2.4 years ago by Anand Rao ▴ 630
0
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1
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2.4k
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Comment: Comment: PDB file pairwise alignment software choice
2.4 years ago by Anand Rao ▴ 630
6
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5
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2.4k
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PDB file pairwise alignment software choice
structure pairwise parsing alignment classification
updated 2.2 years ago by ▴ 10 • written 2.4 years ago by ▴ 630
6
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6
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3.2k
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bbduk flags 'tossbrokenreads' and 'nullifybrokenquality'
BBMap BBduk flags
updated 2.5 years ago by ▴ 30 • written 4.5 years ago by ▴ 630
4
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1
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1.1k
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Answer: Answer: pseudogenes and their parent gene common regions
2.7 years ago by Anand Rao ▴ 630
0
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0
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1.1k
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Comment: Comment: FASTQ headers need additional info?
2.8 years ago by Anand Rao ▴ 630
0
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0
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1.1k
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Comment: Comment: FASTQ headers need additional info?
2.8 years ago by Anand Rao ▴ 630
0
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4
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1.1k
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FASTQ headers need additional info?
format FASTQ
2.8 years ago by Anand Rao ▴ 630
0
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1
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1.1k
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Comment: Comment: Testing independence between 5' and 3' terminal sequences in a DNA database
3.0 years ago by Anand Rao ▴ 630
1
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3
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1.1k
views
Testing independence between 5' and 3' terminal sequences in a DNA database
sequence cluster DNA independence testing
updated 3.0 years ago by 100k • written 3.0 years ago by ▴ 630
0
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0
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759
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Comment: Comment: Identification of protein domain encoding multi-exon genomic intervals
3.0 years ago by Anand Rao ▴ 630
0
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2
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759
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Identification of protein domain encoding multi-exon genomic intervals
geneprediction
3.0 years ago by Anand Rao ▴ 630
0
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0
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763
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Identifying truncated protein domain encoding DNA sequences
protein domain truncation AUGUSTUS fastBlockSearch
3.6 years ago by Anand Rao ▴ 630
0
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0
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2.1k
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Comment: C: TIN from RSEQC calculated for BAM file using RAW or PROCESSED reads?
3.6 years ago by Anand Rao ▴ 630
0
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0
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2.7k
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Comment: C: SizeFactors for BAM normalization
3.7 years ago by Anand Rao ▴ 630
0
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1
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2.7k
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Comment: C: SizeFactors for BAM normalization
3.7 years ago by Anand Rao ▴ 630
0
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0
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2.7k
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Comment: C: SizeFactors for BAM normalization
3.7 years ago by Anand Rao ▴ 630
0
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1
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2.7k
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Comment: C: SizeFactors for BAM normalization
3.7 years ago by Anand Rao ▴ 630
11
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8
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2.7k
views
SizeFactors for BAM normalization
deepTools bamCoverage sizeFactors DESeq2
updated 3.7 years ago by 104k • written 3.7 years ago by ▴ 630
0
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1
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6.1k
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Comment: C: Time Course RNA-Seq
3.7 years ago by Anand Rao ▴ 630
0
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0
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3.9k
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Comment: C: How to find the differences in aligned bam files
3.8 years ago by Anand Rao ▴ 630
0
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1
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3.9k
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Comment: C: How to find the differences in aligned bam files
3.8 years ago by Anand Rao ▴ 630
0
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0
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2.1k
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Comment: C: TIN from RSEQC calculated for BAM file using RAW or PROCESSED reads?
3.8 years ago by Anand Rao ▴ 630
0
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2
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21k
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Comment: C: Is there a tool that sorts gtf files?
3.8 years ago by Anand Rao ▴ 630
0
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0
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1.2k
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Comment: C: Standardizing 3rd party GFF3 file
3.8 years ago by Anand Rao ▴ 630
0
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1
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1.2k
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Comment: C: Standardizing 3rd party GFF3 file
3.8 years ago by Anand Rao ▴ 630
0
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0
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2.3k
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Comment: C: Fixing BAM file errors reported by Picard ValidateSamFile, and in featureCounts'
3.8 years ago by Anand Rao ▴ 630
3
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4
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1.2k
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Standardizing 3rd party GFF3 file
GFF3 format validation
3.8 years ago by Anand Rao ▴ 630
0
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1
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3.9k
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Comment: C: How to find the differences in aligned bam files
3.8 years ago by Anand Rao ▴ 630
0
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2
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3.9k
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Comment: C: How to find the differences in aligned bam files
3.8 years ago by Anand Rao ▴ 630
13
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11
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3.4k
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interpreting GC-bias compute and correct results from DeepTools
GC-bias deepTools
3.8 years ago by Anand Rao ▴ 630
0
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0
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3.4k
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Answer: A: interpreting GC-bias compute and correct results from DeepTools
3.8 years ago by Anand Rao ▴ 630
1
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0
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3.4k
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Comment: C: interpreting GC-bias compute and correct results from DeepTools
3.8 years ago by Anand Rao ▴ 630
0
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1
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3.4k
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Comment: C: interpreting GC-bias compute and correct results from DeepTools
3.8 years ago by Anand Rao ▴ 630
0
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0
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3.4k
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Comment: C: interpreting GC-bias compute and correct results from DeepTools
3.8 years ago by Anand Rao ▴ 630
0
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1
reply
3.4k
views
Comment: C: interpreting GC-bias compute and correct results from DeepTools
3.8 years ago by Anand Rao ▴ 630
0
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1
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3.4k
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Comment: C: interpreting GC-bias compute and correct results from DeepTools
updated 3.8 years ago by 82k • written 3.8 years ago by ▴ 630
0
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1
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3.5k
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Comment: C: How to merge gff3 files?
3.8 years ago by Anand Rao ▴ 630
0
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0
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2.3k
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Comment: C: Fixing BAM file errors reported by Picard ValidateSamFile, and in featureCounts'
3.8 years ago by Anand Rao ▴ 630
0
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0
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1.8k
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Answer: A: How to remove reads with only Ns from bam/sam/cram file?
3.9 years ago by Anand Rao ▴ 630
2
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2
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2.3k
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Answer: A: Fixing BAM file errors reported by Picard ValidateSamFile, and in featureCounts'
3.9 years ago by Anand Rao ▴ 630
4
votes
7
replies
2.3k
views
Fixing BAM file errors reported by Picard ValidateSamFile, and in featureCounts' outfile
BAM featureCounts Picard ValidateSamFile
3.9 years ago by Anand Rao ▴ 630
0
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1
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2.3k
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Comment: C: Fixing BAM file errors reported by Picard ValidateSamFile, and in featureCounts'
3.9 years ago by Anand Rao ▴ 630
0
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0
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4.0k
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Comment: C: GC-BIAS correction for BAM file
3.9 years ago by Anand Rao ▴ 630
0
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0
replies
5.0k
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Comment: C: Running STAR with --twopassMode Basic
3.9 years ago by Anand Rao ▴ 630
0
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1
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5.0k
views
Comment: C: Running STAR with --twopassMode Basic
3.9 years ago by Anand Rao ▴ 630
215 results • Page 1 of 5
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